Non-Coding RNA Search

Ss1.1-rmed15c_n16.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTACACACCAGCCGGGTTTTTATTCGTTCCCTACCCGGAGCGCGTTCTGGGCGCGC
GCGAAAAAAGGAAAAAAACACGTACCTGGCGGCGCTCCGAGGGCAGCCTCGGGGGCCCGC
TGCTGGCGAGGGGGCCCCCAGAAGCCACTTCCCGCCCGGCCGATCGCCCCACGGCCCGTC
CCTCCCTCCCCGGCGACGCACCCCGCCGAGCCAACTCTCCAGGAAGCGCGAGGAGCTTCC
TGTCCGGGCGCCGCGTACGTCTTCCTGCTCCAGGGCCCGCGTCTCCACCCCGTGCAGAGG
ACGCGCAGAGGATCCCCGGGGCCCGGCAGACCCGGAGAGGGGCTCCGAAGCCGAGAAAGC
ACGCGTCCCGTCGCTGGGCTGCGACTCCGGCTGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTACACACCAGCCGGGTTTTTATTCGTTCCCTACCCGGAGCGCGTTCTGGGCGCGC
GCGAAAAAAGGAAAAAAACACGTACCTGGCGGCGCTCCGAGGGCAGCCTCGGGGGCCCGC
TGCTGGCGAGGGGGCCCCCAGAAGCCACTTCCCGCCCGGCCGATCGCCCCACGGCCCGTC
CCTCCCTCCCCGGCGACGCACCCCGCCGAGCCAACTCTCCAGGAAGCGCGAGGAGCTTCC
TGTCCGGGCGCCGCGTACGTCTTCCTGCTCCAGGGCCCGCGTCTCCACCCCGTGCAGAGG
ACGCGCAGAGGATCCCCGGGGCCCGGCAGACCCGGAGAGGGGCTCCGAAGCCGAGAAAGC
ACGCGTCCCGTCGCTGGGCTGCGACTCCGGCTGCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               65-455, gnl|bosTau2|chr19 (45021703-45022091)
               

               
               65-455, gnl|Hg17|chr17 (76933931-76934255)
               

               
               65-455, gnl|Mm7|chr11 (120298405-120298797)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               65-455, gnl|bosTau2|chr19 (45021703-45022091)
               

               
               65-455, gnl|Hg17|chr17 (76933931-76934255)
               

               
               65-455, gnl|Mm7|chr11 (120298405-120298797)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               med (0.116252)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)
               

               
               jej (0.0989218)

	65-455, gnl\|bosTau2\|chr19 (45021703-45022091)
	65-455, gnl\|Hg17\|chr17 (76933931-76934255)
	65-455, gnl\|Mm7\|chr11 (120298405-120298797)