Ss1.1-rmed18c_l8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACCTGTACAACGCCCTGTCCGCCGACGACGAAGAGGACCTGGCTTCGGACAAGGAGATGG GGCAGCCCGGGCTGCGCGGAGGGACTGGCTCGTCCCCGCCTCGGCAGCCGCCCCCTCGCG CCGCGCATCCCCTCGGCAGCAGGAGCCTCCTGGCCGCCGGACCTGGTGGCAGCGCTTCCC CACTGACCAGCGCGCAGGAGAGCGCCTTCCTCAACGACGCCGACATGGTCATGAGCTTTG TGAACCTGGTGGAGTACGACAAGGAGCTCTCCCCTCGCCAGCGACACCACAAAGAGTTCA AGTTCAACCTGTCCCAGGTTCCTGAGGGCGAGGCGGTGACGGCTGCAGAATTCCGAATCT ACAAGGACTGTGTTGTGGGCAGTTTTAAAAACCAAACTTTTCTTATCAGCATTTATCAAG TCTTACAGCAGCGTCAACACAGAGACTCTGACCTGTTTCTGTGGGACACCCGCGTCGTGT GGGCCTCGGAGGAGGTCTGGCTGGAATTTGACATCACGGCCACCAGCAACCTGTGGGTCC TGACCCCGCAGCACAACCTGGGGCTGCAGCTGGGCGTGGTGACGCAGGACGGGCTCAGCA TCAGCCCCCGAGCCGCGGGCTTGGTGGGCCGGGACGGCCCCTACGACAAGCAGCCCTTCA TGGTGGCCTTCTTCAAGGTGAGCGAGGTCCACGTGCGCACCGCCAGGTCGGCCACCGGGC GGCGGCGACAGCAGAGCCGCAACCGCTCCACGCAGGCCCAGGACGTGTCGCGGGCCTCCA GCGCCTCAGATTATAACAGCAGTGAGCTGAAGACGGCCTGCAGGAAGCACGAGCTCTACG TCAGCTTCCAGGACCTGGGCTGGCAGGACTGGATCATCGCACCCAAGGGTTACGCGGCCA ATTCTGTGACGGGGAGTGCTCCTTCCCTCTCAACGCGCACATGAACGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACCTGTACAACGCCCTGTCCGCCGACGACGAAGAGGACCTGGCTTCGGACAAGGAGATGG GGCAGCCCGGGCTGCGCGGAGGGACTGGCTCGTCCCCGCCTCGGCAGCCGCCCCCTCGCG CCGCGCATCCCCTCGGCAGCAGGAGCCTCCTGGCCGCCGGACCTGGTGGCAGCGCTTCCC CACTGACCAGCGCGCAGGAGAGCGCCTTCCTCAACGACGCCGACATGGTCATGAGCTTTG TGAACCTGGTGGAGTACGACAAGGAGCTCTCCCCTCGCCAGCGACACCACAAAGAGTTCA AGTTCAACCTGTCCCAGGTTCCTGAGGGCGAGGCGGTGACGGCTGCAGAATTCCGAATCT ACAAGGACTGTGTTGTGGGCAGTTTTAAAAACCAAACTTTTCTTATCAGCATTTATCAAG TCTTACAGCAGCGTCAACACAGAGACTCTGACCTGTTTCTGTGGGACACCCGCGTCGTGT GGGCCTCGGAGGAGGTCTGGCTGGAATTTGACATCACGGCCACCAGCAACCTGTGGGTCC TGACCCCGCAGCACAACCTGGGGCTGCAGCTGGGCGTGGTGACGCAGGACGGGCTCAGCA TCAGCCCCCGAGCCGCGGGCTTGGTGGGCCGGGACGGCCCCTACGACAAGCAGCCCTTCA TGGTGGCCTTCTTCAAGGTGAGCGAGGTCCACGTGCGCACCGCCAGGTCGGCCACCGGGC GGCGGCGACAGCAGAGCCGCAACCGCTCCACGCAGGCCCAGGACGTGTCGCGGGCCTCCA GCGCCTCAGATTATAACAGCAGTGAGCTGAAGACGGCCTGCAGGAAGCACGAGCTCTACG TCAGCTTCCAGGACCTGGGCTGGCAGGACTGGATCATCGCACCCAAGGGTTACGCGGCCA ATTCTGTGACGGGGAGTGCTCCTTCCCTCTCAACGCGCACATGAACGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-256, gnl|bosTau2|chr23 (39871515-39871260) | |
| 1-256, gnl|Hg17|chr6 (7672600-7672858) | |
| 1-256, gnl|Mm7|chr13 (37765234-37765489) | |
| 440-592, gnl|bosTau2|chr13 (40298332-40298484) | |
| 440-592, gnl|canFam2|chr24 (45214580-45214756) | |
| 440-592, gnl|danRer3|chr23 (2415510-2415342) | |
| 440-592, gnl|dasNov1|scaffold_38793 (6615-6773) | |
| 440-592, gnl|echTel1|scaffold_276663 (45602-45761) | |
| 440-592, gnl|fr1|chrUn (57718798-57718947) | |
| 440-592, gnl|galGal2|chr20 (11233285-11233125) | |
| 440-592, gnl|hg17|chr20 (55210930-55211106) | |
| 440-592, gnl|Hg17|chr20 (55211089-55210937) | |
| 440-592, gnl|loxAfr1|scaffold_82123 (1102-1260) | |
| 440-592, gnl|mm7|chr2 (172637829-172638006) | |
| 440-592, gnl|Mm7|chr2 (172637987-172637835) | |
| 440-592, gnl|monDom2|scaffold_1 (170744697-170744866) | |
| 440-592, gnl|oryCun1|scaffold_140967 (2198-2027) | |
| 440-592, gnl|panTro1|chr21 (58135345-58135521) | |
| 440-592, gnl|rheMac2|chr10 (7333479-7333303) | |
| 440-592, gnl|rn3|chr3 (163655391-163655566) | |
| 440-592, gnl|tetNig1|chr11 (1863451-1863302) | |
| 440-592, gnl|xenTro1|scaffold_220 (1486900-1486737) | |
| 597-763, gnl|bosTau2|chr13 (40315921-40316080) | |
| 597-763, gnl|Hg17|chr20 (55192377-55192218) | |
| 597-763, gnl|Mm7|chr2 (172623906-172623747) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-256, gnl|bosTau2|chr23 (39871515-39871260) | |
| 1-256, gnl|Hg17|chr6 (7672600-7672858) | |
| 1-256, gnl|Mm7|chr13 (37765234-37765489) | |
| 440-592, gnl|bosTau2|chr13 (40298332-40298484) | |
| 440-592, gnl|canFam2|chr24 (45214580-45214756) | |
| 440-592, gnl|danRer3|chr23 (2415510-2415342) | |
| 440-592, gnl|dasNov1|scaffold_38793 (6615-6773) | |
| 440-592, gnl|echTel1|scaffold_276663 (45602-45761) | |
| 440-592, gnl|fr1|chrUn (57718798-57718947) | |
| 440-592, gnl|galGal2|chr20 (11233285-11233125) | |
| 440-592, gnl|hg17|chr20 (55210930-55211106) | |
| 440-592, gnl|Hg17|chr20 (55211089-55210937) | |
| 440-592, gnl|loxAfr1|scaffold_82123 (1102-1260) | |
| 440-592, gnl|mm7|chr2 (172637829-172638006) | |
| 440-592, gnl|Mm7|chr2 (172637987-172637835) | |
| 440-592, gnl|monDom2|scaffold_1 (170744697-170744866) | |
| 440-592, gnl|oryCun1|scaffold_140967 (2198-2027) | |
| 440-592, gnl|panTro1|chr21 (58135345-58135521) | |
| 440-592, gnl|rheMac2|chr10 (7333479-7333303) | |
| 440-592, gnl|rn3|chr3 (163655391-163655566) | |
| 440-592, gnl|tetNig1|chr11 (1863451-1863302) | |
| 440-592, gnl|xenTro1|scaffold_220 (1486900-1486737) | |
| 597-763, gnl|bosTau2|chr13 (40315921-40316080) | |
| 597-763, gnl|Hg17|chr20 (55192377-55192218) | |
| 597-763, gnl|Mm7|chr2 (172623906-172623747) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) | |
| cty (0.10408) |