Non-Coding RNA Search

Ss1.1-rmed18c_p9.5

Sequence:


               
               CTAATGCTGCTGTCACATGCAGCCAGTAAAGTTCCCTAAAATCCTTTGTGAAAAATTTGG
GGCTTTTCACGAAATCAGAAAAAGTTTACCTTTTCTCCCGGGAGTCAAAAATAGCTTAGA
GAAGAATTCATCTTTCATTTCTCCAGCTGGACATTTTTGATCAGTAAGAGTCATGCAGCT
AGAGCTCTCCACCTGTGTCTTTCTGTGTCTCTTGCCACTCGGCTTTAGTGCCATCAGGAG
ATACTACCTGGGCGCAGTGGAACTGTCCTGGGACTACCGGCAAAGTGAACTCCTCCGTGA
GCTGCACGTGGACACCAGATTTCCTGCTACAGCGCCAGGAGCTCTTCCGTTGGGCCCGTC
AGTCCTGTACAAAAAGACTGTGTTCGTAGAGTTCACGGATCAACTTTTCAGCGTTGCCAG
GCCCAGGCCACCATGGATGGGTCTGCTGGGTCCTACCATCCAGGCTGAGGTTTACGACAC
GGTGGTCGTTACCCTGAAGAACATGGCTTCTCATCCCGTTAGTCTTCACGCTGTCGGCGT
CTCCTTCTGGAAATCTTCCGAAGGTGAGTCAGAGGCTCTCCTACTGCCCCAGGGATGGAG
GACCACTGGCGATGAGGTCTTACGACGGGGGACTCTTGGAGTCAGGATTCAACGCAAGGC
CCATCTCACGCAGCCACGGAGGGGAGGGCGTGTCGCCATAGTCTATGTCGATGCGACAGA
CTGGGTCGCTGCTATGGCCCAAAAAATAATAATAAATAAATTACATCAGTAAAAAAAAAA
AAAAAAAAAACTCGAGACTAGTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAATGCTGCTGTCACATGCAGCCAGTAAAGTTCCCTAAAATCCTTTGTGAAAAATTTGG
GGCTTTTCACGAAATCAGAAAAAGTTTACCTTTTCTCCCGGGAGTCAAAAATAGCTTAGA
GAAGAATTCATCTTTCATTTCTCCAGCTGGACATTTTTGATCAGTAAGAGTCATGCAGCT
AGAGCTCTCCACCTGTGTCTTTCTGTGTCTCTTGCCACTCGGCTTTAGTGCCATCAGGAG
ATACTACCTGGGCGCAGTGGAACTGTCCTGGGACTACCGGCAAAGTGAACTCCTCCGTGA
GCTGCACGTGGACACCAGATTTCCTGCTACAGCGCCAGGAGCTCTTCCGTTGGGCCCGTC
AGTCCTGTACAAAAAGACTGTGTTCGTAGAGTTCACGGATCAACTTTTCAGCGTTGCCAG
GCCCAGGCCACCATGGATGGGTCTGCTGGGTCCTACCATCCAGGCTGAGGTTTACGACAC
GGTGGTCGTTACCCTGAAGAACATGGCTTCTCATCCCGTTAGTCTTCACGCTGTCGGCGT
CTCCTTCTGGAAATCTTCCGAAGGTGAGTCAGAGGCTCTCCTACTGCCCCAGGGATGGAG
GACCACTGGCGATGAGGTCTTACGACGGGGGACTCTTGGAGTCAGGATTCAACGCAAGGC
CCATCTCACGCAGCCACGGAGGGGAGGGCGTGTCGCCATAGTCTATGTCGATGCGACAGA
CTGGGTCGCTGCTATGGCCCAAAAAATAATAATAAATAAATTACATCAGTAAAAAAAAAA
AAAAAAAAAACTCGAGACTAGTTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61822611|ref|XP_617364.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61822611|ref|XP_617364.1|

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               5-318, gnl|bosTau2|chrX (13215365-13215689)
               

               
               5-318, gnl|Hg17|chrX (153814703-153814389)
               

               
               5-318, gnl|Mm7|chrX (70766461-70766136)
               


               
               440-676, gnl|bosTau2|chrX (13235382-13235626)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-318, gnl|bosTau2|chrX (13215365-13215689)
               

               
               5-318, gnl|Hg17|chrX (153814703-153814389)
               

               
               5-318, gnl|Mm7|chrX (70766461-70766136)
               


               
               440-676, gnl|bosTau2|chrX (13235382-13235626)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.232504)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.232504)

	5-318, gnl\|bosTau2\|chrX (13215365-13215689)
	5-318, gnl\|Hg17\|chrX (153814703-153814389)
	5-318, gnl\|Mm7\|chrX (70766461-70766136)

	440-676, gnl\|bosTau2\|chrX (13235382-13235626)