Non-Coding RNA Search

Ss1.1-rmed19c_d3.5

Sequence:


               
               TTGATCGTGGACTACTAAACGCCTTTGCATGGAAGGGCTCTGATTTGCACAATTTACTGA
AAAAGAGGTCACAAACCCATAGAAGAGGAGGTAGGCTGAGGTGGGGAGTCTAAACCATGA
AGGGTGACGAATACATCTGAGAATTTGGAGAGCTCGGTCAGCTCAATCGGAAATGTTTCC
CCTTGGTCTAGAAAGAAGGGGAAAAGGATGAAGAGCTGTCACCCACTCCGTGGTTCTCAA
TAAACCATTGTTACTCTTGGGAACCTTCAGGCCATGTGGTCACCAAGCAGAGCAAGCCCC
CCCTTTCTCTTCCCAGTCACATGGCTGTGTGTGGATGGCTTTAATTTTAGGAGAAGGGCG
ATTAACACTTTTGACAGTATTTTGTTTTGCTTTGATTCGGGGGGTTGTTTTGCTTTTGGT
GGTTGTTTTGGAAAAACAGTTTATAAACTGATTTTTGTAGTTTTGGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGATCGTGGACTACTAAACGCCTTTGCATGGAAGGGCTCTGATTTGCACAATTTACTGA
AAAAGAGGTCACAAACCCATAGAAGAGGAGGTAGGCTGAGGTGGGGAGTCTAAACCATGA
AGGGTGACGAATACATCTGAGAATTTGGAGAGCTCGGTCAGCTCAATCGGAAATGTTTCC
CCTTGGTCTAGAAAGAAGGGGAAAAGGATGAAGAGCTGTCACCCACTCCGTGGTTCTCAA
TAAACCATTGTTACTCTTGGGAACCTTCAGGCCATGTGGTCACCAAGCAGAGCAAGCCCC
CCCTTTCTCTTCCCAGTCACATGGCTGTGTGTGGATGGCTTTAATTTTAGGAGAAGGGCG
ATTAACACTTTTGACAGTATTTTGTTTTGCTTTGATTCGGGGGGTTGTTTTGCTTTTGGT
GGTTGTTTTGGAAAAACAGTTTATAAACTGATTTTTGTAGTTTTGGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-468, gnl|bosTau2|chr1 (54528548-54528093)
               

               
               1-468, gnl|Hg17|chr3 (187248776-187248312)
               

               
               1-468, gnl|Mm7|chr16 (22033137-22032688)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-468, gnl|bosTau2|chr1 (54528548-54528093)
               

               
               1-468, gnl|Hg17|chr3 (187248776-187248312)
               

               
               1-468, gnl|Mm7|chr16 (22033137-22032688)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cut (0.169924)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)
               

               
               med (0.116252)

	1-468, gnl\|bosTau2\|chr1 (54528548-54528093)
	1-468, gnl\|Hg17\|chr3 (187248776-187248312)
	1-468, gnl\|Mm7\|chr16 (22033137-22032688)