Ss1.1-rmed20c_c7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGGTGGGCAGGCTGTGGTGCCCGTCCGGCTGGGTGCCGTGAGCACAGGCGGGAGGGAC AGAGCAGAGCCAGCGCCCCCCACCCACTTGGGGTGAGTAGAACCTGGCACGCCGCCTTAG CGATTGCTCCAGAAATTGGCACGTGCTCAGATTCGCAGCTGCTTTGAAACTGCCAGGTGC CGGATGGTCTTCTTGCAGTAGTCCTCGGCCAGCGGGACTGCCCTCAGCATGTCTCGCCCC CACTGCTCCAGCCGCTTTCCCTGGATGGCGTAGGAGGCAAACAGGGCCGTGCACAATGAC CCTAGGAAGCCCGTGGGGTGGTTGTGAGTCATCCGGCCACACTCCACGCTGACCTCCACC AGCGTCCCCAGCCGCTCCGGCTTCCAGTACCGCATGCCCACACACATCGCCTTGGTGGCA GCGCCAAACCCCGAGCCTTTGTCGTTGAAGGGCGTGTGCCAGGCCAGGAGATAGTTGTCT GGCTTCAGCTGTGAGCAGCCCTCGATGGTGGCGGGGTCGGCGCGGTGCTCCGGAAGCTTC TCCAGGGCGTCCACGTAGCGCCTCACCATCTCGCGGTACAGGTCGTCCAGGCACCAGAAG TCTGTGACCAGGGCCTCGGCCGTCGCCATGTGCATGATGGTGTTGTCGCTCACTGGCCAC TTCTCGGGGGCCAGCACCAGGTGGTCCAGCCCCCCCACTTTCTGCAGCTCCTCCTGGACC CTGGGGCCCGAGGCGCTGTTCTCCATGAAGGCATTTCTGTAGCCAAGGGCGTCCCCCACG GCGCCCAGCAGCATCGCTGCCCGAAACTTCTCCATCTCGGCGGGCGGCTGCTCTGCTCAG CCTCTGTGGCCTCGCCCTGAGTCCGCCCGGCCGGCCTCTGCTCTGGTCATCGCGTCGCCG TCAGGAACCTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGGTGGGCAGGCTGTGGTGCCCGTCCGGCTGGGTGCCGTGAGCACAGGCGGGAGGGAC AGAGCAGAGCCAGCGCCCCCCACCCACTTGGGGTGAGTAGAACCTGGCACGCCGCCTTAG CGATTGCTCCAGAAATTGGCACGTGCTCAGATTCGCAGCTGCTTTGAAACTGCCAGGTGC CGGATGGTCTTCTTGCAGTAGTCCTCGGCCAGCGGGACTGCCCTCAGCATGTCTCGCCCC CACTGCTCCAGCCGCTTTCCCTGGATGGCGTAGGAGGCAAACAGGGCCGTGCACAATGAC CCTAGGAAGCCCGTGGGGTGGTTGTGAGTCATCCGGCCACACTCCACGCTGACCTCCACC AGCGTCCCCAGCCGCTCCGGCTTCCAGTACCGCATGCCCACACACATCGCCTTGGTGGCA GCGCCAAACCCCGAGCCTTTGTCGTTGAAGGGCGTGTGCCAGGCCAGGAGATAGTTGTCT GGCTTCAGCTGTGAGCAGCCCTCGATGGTGGCGGGGTCGGCGCGGTGCTCCGGAAGCTTC TCCAGGGCGTCCACGTAGCGCCTCACCATCTCGCGGTACAGGTCGTCCAGGCACCAGAAG TCTGTGACCAGGGCCTCGGCCGTCGCCATGTGCATGATGGTGTTGTCGCTCACTGGCCAC TTCTCGGGGGCCAGCACCAGGTGGTCCAGCCCCCCCACTTTCTGCAGCTCCTCCTGGACC CTGGGGCCCGAGGCGCTGTTCTCCATGAAGGCATTTCTGTAGCCAAGGGCGTCCCCCACG GCGCCCAGCAGCATCGCTGCCCGAAACTTCTCCATCTCGGCGGGCGGCTGCTCTGCTCAG CCTCTGTGGCCTCGCCCTGAGTCCGCCCGGCCGGCCTCTGCTCTGGTCATCGCGTCGCCG TCAGGAACCTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 170-311, gnl|bosTau2|chr12 (48266691-48266550) | |
| 170-311, gnl|canFam2|chr22 (63696577-63696730) | |
| 170-311, gnl|danRer3|chrUn (104897807-104897650) | |
| 170-311, gnl|dasNov1|scaffold_14068 (8126-8279) | |
| 170-311, gnl|echTel1|scaffold_110231 (491-338) | |
| 170-311, gnl|fr1|chrUn (163011367-163011223) | |
| 170-311, gnl|galGal2|chr1 (130427595-130427446) | |
| 170-311, gnl|hg17|chr13 (113131262-113131415) | |
| 170-311, gnl|Hg17|chr13 (113131268-113131409) | |
| 170-311, gnl|loxAfr1|scaffold_222422 (497-650) | |
| 170-311, gnl|mm7|chr8 (13219683-13219835) | |
| 170-311, gnl|Mm7|chr8 (13219689-13219830) | |
| 170-311, gnl|panTro1|chr14 (96753958-96754090) | |
| 170-311, gnl|rheMac2|chr17 (93542876-93543029) | |
| 170-311, gnl|rn3|chr16 (81148522-81148369) | |
| 170-311, gnl|tetNig1|chr5 (8287210-8287062) | |
| 170-311, gnl|xenTro1|scaffold_1119 (13616-13763) | |
| 602-912, gnl|bosTau2|chr12 (48256462-48256153) | |
| 602-912, gnl|Hg17|chr13 (113155540-113155863) | |
| 602-912, gnl|Mm7|chr8 (13228038-13228357) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 170-311, gnl|bosTau2|chr12 (48266691-48266550) | |
| 170-311, gnl|canFam2|chr22 (63696577-63696730) | |
| 170-311, gnl|danRer3|chrUn (104897807-104897650) | |
| 170-311, gnl|dasNov1|scaffold_14068 (8126-8279) | |
| 170-311, gnl|echTel1|scaffold_110231 (491-338) | |
| 170-311, gnl|fr1|chrUn (163011367-163011223) | |
| 170-311, gnl|galGal2|chr1 (130427595-130427446) | |
| 170-311, gnl|hg17|chr13 (113131262-113131415) | |
| 170-311, gnl|Hg17|chr13 (113131268-113131409) | |
| 170-311, gnl|loxAfr1|scaffold_222422 (497-650) | |
| 170-311, gnl|mm7|chr8 (13219683-13219835) | |
| 170-311, gnl|Mm7|chr8 (13219689-13219830) | |
| 170-311, gnl|panTro1|chr14 (96753958-96754090) | |
| 170-311, gnl|rheMac2|chr17 (93542876-93543029) | |
| 170-311, gnl|rn3|chr16 (81148522-81148369) | |
| 170-311, gnl|tetNig1|chr5 (8287210-8287062) | |
| 170-311, gnl|xenTro1|scaffold_1119 (13616-13763) | |
| 602-912, gnl|bosTau2|chr12 (48256462-48256153) | |
| 602-912, gnl|Hg17|chr13 (113155540-113155863) | |
| 602-912, gnl|Mm7|chr8 (13228038-13228357) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) | |
| med (0.116252) |