Non-Coding RNA Search

Ss1.1-rmed20c_i15.5

Sequence:


               
               TAGTCTCCTCATGGACTCCTATGTGAGCTCTACCACGGGGGTAAGACCCTTGCATGTGCT
TCAGGCAGACTTGGAAAATACTTGCTTCTACAGAACAGAAATTGGGCAGTTCTCATCATC
TCGTAGCTTTACCAACAACCATACACGTTTGTCTTTATTCCATGCATCCATTTGTAGCTG
GTCAGCTTAAGGAGTCAACGAGCATTCATCTCTGATGGAAGCACCAGAGGAAACATTTAA
GGGAAGCCATCGCTTGCCTCAGAGGTTGAGAATCGCTTCCAGATGTCCCAGTTTGGAACA
GCTGTGGCTTACACAGACACCTTCTGAGCCTGCTGTTAGGCCTTCCTTTTGCCCTCAAGT
CTTTGGAAAGCAGGATGCCAAGCAGAATTGTGGCTCACATCTGGCTCTAGTGTTGGTTTG
CAAAGTCTTGAACCTGGGAGTTCCCATCGTGGTGCAGTGGAAACAAATCTGACTAGGAAC
CGTGAAGTTGTGGGTTCGATCCCTGACCTCACTCAGTGGGTTAAGCATCCAGTGTTGCCG
TGAGCTGTGGTGTAGGTCGCAGATGCAGCTCGGATCTGGCTTTTCTGTGGCTAGGGCCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGTCTCCTCATGGACTCCTATGTGAGCTCTACCACGGGGGTAAGACCCTTGCATGTGCT
TCAGGCAGACTTGGAAAATACTTGCTTCTACAGAACAGAAATTGGGCAGTTCTCATCATC
TCGTAGCTTTACCAACAACCATACACGTTTGTCTTTATTCCATGCATCCATTTGTAGCTG
GTCAGCTTAAGGAGTCAACGAGCATTCATCTCTGATGGAAGCACCAGAGGAAACATTTAA
GGGAAGCCATCGCTTGCCTCAGAGGTTGAGAATCGCTTCCAGATGTCCCAGTTTGGAACA
GCTGTGGCTTACACAGACACCTTCTGAGCCTGCTGTTAGGCCTTCCTTTTGCCCTCAAGT
CTTTGGAAAGCAGGATGCCAAGCAGAATTGTGGCTCACATCTGGCTCTAGTGTTGGTTTG
CAAAGTCTTGAACCTGGGAGTTCCCATCGTGGTGCAGTGGAAACAAATCTGACTAGGAAC
CGTGAAGTTGTGGGTTCGATCCCTGACCTCACTCAGTGGGTTAAGCATCCAGTGTTGCCG
TGAGCTGTGGTGTAGGTCGCAGATGCAGCTCGGATCTGGCTTTTCTGTGGCTAGGGCCAG

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-176, gnl|bosTau2|chr2 (73455134-73455307)
               

               
               1-176, gnl|Hg17|chr1 (32291600-32291769)
               


               
               181-364, gnl|bosTau2|chr2 (73456828-73457003)
               

               
               181-364, gnl|Hg17|chr1 (32291770-32291953)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-176, gnl|bosTau2|chr2 (73455134-73455307)
               

               
               1-176, gnl|Hg17|chr1 (32291600-32291769)
               


               
               181-364, gnl|bosTau2|chr2 (73456828-73457003)
               

               
               181-364, gnl|Hg17|chr1 (32291770-32291953)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.232504)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.232504)

	1-176, gnl\|bosTau2\|chr2 (73455134-73455307)
	1-176, gnl\|Hg17\|chr1 (32291600-32291769)

	181-364, gnl\|bosTau2\|chr2 (73456828-73457003)
	181-364, gnl\|Hg17\|chr1 (32291770-32291953)