Non-Coding RNA Search

Ss1.1-rmed21c_f16.5

Sequence:


               
               GCTGCGTGTCCCGGAGCTCCCAGCCCACCAGTCTCAGGCACCCCTCACAGAGCTGGGACT
CCTGGACCCCAATGGAGCAACAGCCACTTACAGTTGGACTCAGCACAACGTCTCAATCCT
TTGGACTTAGGCCAGGCATGGCTGCCCTTCTGTTCTGTTTCCTGCTGATCTTCATGCAAC
AGCTGCTTTACTCTCAGCCGTCTTCAAAAACCCCAGCCCCACCAAGTTCTTCCAGATGAT
TCTGTTGCCTGGATTAATTTAAGCATCATTTCCTCCTGATGACGCAGCAAAATGGAGAGC
CTCGTGCTCCAGAGCACAAAGTCTGCAGAAAATGTTGGAGTGTATTAACATCAACCTCAG
TATTTGCTTTTTCGTGATACTTCATCACCTTCTCTTACCCCTTTTAATATGGTCACATCA
TTCACGTGGGTTTAAGGCCCAGTTTCTGGGCAGGACAGCCACGAGGCCTCACCCTGTCAT
CACAGAGTTCGTGAAGTCATCTGGTTGTGGCTGGGACGCAGCCTCCAGCAGTCCCTAAGC
AAAGAATAAACATATGCTTTTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCGTGTCCCGGAGCTCCCAGCCCACCAGTCTCAGGCACCCCTCACAGAGCTGGGACT
CCTGGACCCCAATGGAGCAACAGCCACTTACAGTTGGACTCAGCACAACGTCTCAATCCT
TTGGACTTAGGCCAGGCATGGCTGCCCTTCTGTTCTGTTTCCTGCTGATCTTCATGCAAC
AGCTGCTTTACTCTCAGCCGTCTTCAAAAACCCCAGCCCCACCAAGTTCTTCCAGATGAT
TCTGTTGCCTGGATTAATTTAAGCATCATTTCCTCCTGATGACGCAGCAAAATGGAGAGC
CTCGTGCTCCAGAGCACAAAGTCTGCAGAAAATGTTGGAGTGTATTAACATCAACCTCAG
TATTTGCTTTTTCGTGATACTTCATCACCTTCTCTTACCCCTTTTAATATGGTCACATCA
TTCACGTGGGTTTAAGGCCCAGTTTCTGGGCAGGACAGCCACGAGGCCTCACCCTGTCAT
CACAGAGTTCGTGAAGTCATCTGGTTGTGGCTGGGACGCAGCCTCCAGCAGTCCCTAAGC
AAAGAATAAACATATGCTTTTATT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               224-564, gnl|bosTau2|chr11 (68733120-68733457)
               

               
               224-564, gnl|Hg17|chr2 (8329357-8329711)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               224-564, gnl|bosTau2|chr11 (68733120-68733457)
               

               
               224-564, gnl|Hg17|chr2 (8329357-8329711)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mas (0.210305)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               med (0.116252)

	224-564, gnl\|bosTau2\|chr11 (68733120-68733457)
	224-564, gnl\|Hg17\|chr2 (8329357-8329711)