Non-Coding RNA Search

Ss1.1-rmed23c_o16.5

Sequence:


               
               GCAAAGTCATTTTATTTAATATACTGATTACACATTCTCAATCATAAATGAGGTAGGGAG
CCTCCCTCCCCCAGTGGCCATGTTTACAGAAGTGTGTTTTGTCTATAAAGTACAAGAGTT
TTAATGTTTATGTAAATTATGCAGGTGATAACCTATGGCTTGGAACTGTTTATCGGGCTT
TCTAGCTGAATTTTCAAATGAAATGAACTATGCTTATTGCTGGCACATTGATCCTATTTT
CTGGAGCATTTTTCCTGTTTCTAGAATTACATATGTTCCTTTGTCATTATCCCTTGATAT
GCCTTGTAACCTAAGGTATTAAAAGCTGGTTAACATAGATGAGGGAAATGCGTTTTTTTA
AATCCATGAACCTTCATTGTATGCTTTCATTATTCATGTTATATGTTTCTACGGCAACTC
TGAGGTCAGTGAAGTTTAGAAATAAGATACCAATGTTAATGAAAAGTGTGTACTCCTCTT
GCTTTTGCACGGCTTGGCTTAGCATCAGAGGTATATTAGGGCCACTTGAAAGCATGAAGA
CAAGTTGTATGGGAACAGGTTTCTCTCAGTAGCACATTTGCTTTTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAAAGTCATTTTATTTAATATACTGATTACACATTCTCAATCATAAATGAGGTAGGGAG
CCTCCCTCCCCCAGTGGCCATGTTTACAGAAGTGTGTTTTGTCTATAAAGTACAAGAGTT
TTAATGTTTATGTAAATTATGCAGGTGATAACCTATGGCTTGGAACTGTTTATCGGGCTT
TCTAGCTGAATTTTCAAATGAAATGAACTATGCTTATTGCTGGCACATTGATCCTATTTT
CTGGAGCATTTTTCCTGTTTCTAGAATTACATATGTTCCTTTGTCATTATCCCTTGATAT
GCCTTGTAACCTAAGGTATTAAAAGCTGGTTAACATAGATGAGGGAAATGCGTTTTTTTA
AATCCATGAACCTTCATTGTATGCTTTCATTATTCATGTTATATGTTTCTACGGCAACTC
TGAGGTCAGTGAAGTTTAGAAATAAGATACCAATGTTAATGAAAAGTGTGTACTCCTCTT
GCTTTTGCACGGCTTGGCTTAGCATCAGAGGTATATTAGGGCCACTTGAAAGCATGAAGA
CAAGTTGTATGGGAACAGGTTTCTCTCAGTAGCACATTTGCTTTTTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-588, gnl|bosTau2|chr19 (14084858-14084282)
               

               
               1-588, gnl|Hg17|chr17 (24900076-24900678)
               

               
               1-588, gnl|Mm7|chr11 (77613683-77613089)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-588, gnl|bosTau2|chr19 (14084858-14084282)
               

               
               1-588, gnl|Hg17|chr17 (24900076-24900678)
               

               
               1-588, gnl|Mm7|chr11 (77613683-77613089)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fce (0.271592)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               med (0.116252)

	1-588, gnl\|bosTau2\|chr19 (14084858-14084282)
	1-588, gnl\|Hg17\|chr17 (24900076-24900678)
	1-588, gnl\|Mm7\|chr11 (77613683-77613089)