Non-Coding RNA Search

Ss1.1-rmed24c_d23.5

Sequence:


               
               ATGGATGCCTGTGGTGAGACAAACAATCAGAATTTTCAGCAGCGATACCATGCAGAAGAA
GTAGAAGAAAGATTTGGAAGGTTCAAGCCAGGAGTTATTAGTGAGGAACTTCAAGATGCA
CTGGGTGTGACAGACAAGAGTCTCCCACCTTTTATATATCGAATGCGCCAGCTAGGATAC
CCACCAGGCTGGCTTAAAGAGGCCGAACTAGAGAACTCAGGGCTTGCACTCTACGATGGC
AAAGATGGTGCTGATGGAGAAACAGAAGCTGGAGAAGTACAACAAAATAAAAGTGTCACT
TATGATCTCTCGAAATGGGTAAACTATCCAGGTTTTAATATATCTACTCCCAGAGGAATT
CCAGATGAATGGAGGATGTTCGGTTCCATACCAATGCAGGCATGTCAGCAGAAAGACGTG
TTTGCCAGTTACCTAACTTCTAACTTTCAAGCGCCAAGTGTAAGGTCCAACAGCAAGAGG
GCTTCATCTCAGTCCAGCCCCAGCAGTCCAAAGAAGCAGAAGAAGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGATGCCTGTGGTGAGACAAACAATCAGAATTTTCAGCAGCGATACCATGCAGAAGAA
GTAGAAGAAAGATTTGGAAGGTTCAAGCCAGGAGTTATTAGTGAGGAACTTCAAGATGCA
CTGGGTGTGACAGACAAGAGTCTCCCACCTTTTATATATCGAATGCGCCAGCTAGGATAC
CCACCAGGCTGGCTTAAAGAGGCCGAACTAGAGAACTCAGGGCTTGCACTCTACGATGGC
AAAGATGGTGCTGATGGAGAAACAGAAGCTGGAGAAGTACAACAAAATAAAAGTGTCACT
TATGATCTCTCGAAATGGGTAAACTATCCAGGTTTTAATATATCTACTCCCAGAGGAATT
CCAGATGAATGGAGGATGTTCGGTTCCATACCAATGCAGGCATGTCAGCAGAAAGACGTG
TTTGCCAGTTACCTAACTTCTAACTTTCAAGCGCCAAGTGTAAGGTCCAACAGCAAGAGG
GCTTCATCTCAGTCCAGCCCCAGCAGTCCAAAGAAGCAGAAGAAGGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               100-244, gnl|bosTau2|chr17 (27907140-27907284)
               

               
               100-244, gnl|Hg17|chr12 (121491093-121490949)
               

               
               100-244, gnl|Mm7|chr5 (122953257-122953113)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-244, gnl|bosTau2|chr17 (27907140-27907284)
               

               
               100-244, gnl|Hg17|chr12 (121491093-121490949)
               

               
               100-244, gnl|Mm7|chr5 (122953257-122953113)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nco (0.161734)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               med (0.116252)

	100-244, gnl\|bosTau2\|chr17 (27907140-27907284)
	100-244, gnl\|Hg17\|chr12 (121491093-121490949)
	100-244, gnl\|Mm7\|chr5 (122953257-122953113)