Ss1.1-rmed24c_m7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACCGGAAGGAGATGGAACAAATCGTGGAGGAGGAAGAGAAGTTTAAGAAGCAGTGGGAAG AAGACTGGGGCTCAAAGGAACAGCTGCTGTCACCTAAAACCATCACTGCCGAGGTGCACC CAGTACCCCTTCGCAAGCCAAAGTATAATCTGGACATGGACCCCGAGTCTGACCCGGCAG ACGACCTGGATGGAGGCACGGAGAAGCAGGGAGAGCAGGATTTCCGGAAATACGAGGAAG GCTTTGACCCCTGCTCCATGTTCACCCCAGAGCAGATCGTAGGGAAGGATGTCCGGCTCC TGCGCATTAAGAAGGAGGGACCCTTAGACCTGGCCCTGGAAGGCGGTGTGGACTCCCCAA TCGGGAAGGTGGTCGTCTCAGCTGTTTACGAGGGTGGAGCTGCTGAGCGGCACGGTGGCA TTGTGAAAGGGGATGAGGTCATGGCCATCAATGGCAAGATCATAACAGACTACACCCTGG CTGAGGCTGAGGCCGCCCTGCAGAAGGCCTGGAATCAGGGGGACTGGATTGACCTTGTTA TTGCCGTCTGTCCCCCCAAGGAGTATGACGATGAGCTGACTTTCTTCTGAAATCCAGAGG AGAAACCAATTCACCCCTAAAAGCCAGAGAACTCTGGACCCAGCCTCCTGAACACCATGC CTAGAAGCAGCCGTGAGAGACAGCAGCCTACAGGCACCCCCAGGAACCCCAAAGCTGGCA CTCAAGGATGGCAAACTCCCTTGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACCGGAAGGAGATGGAACAAATCGTGGAGGAGGAAGAGAAGTTTAAGAAGCAGTGGGAAG AAGACTGGGGCTCAAAGGAACAGCTGCTGTCACCTAAAACCATCACTGCCGAGGTGCACC CAGTACCCCTTCGCAAGCCAAAGTATAATCTGGACATGGACCCCGAGTCTGACCCGGCAG ACGACCTGGATGGAGGCACGGAGAAGCAGGGAGAGCAGGATTTCCGGAAATACGAGGAAG GCTTTGACCCCTGCTCCATGTTCACCCCAGAGCAGATCGTAGGGAAGGATGTCCGGCTCC TGCGCATTAAGAAGGAGGGACCCTTAGACCTGGCCCTGGAAGGCGGTGTGGACTCCCCAA TCGGGAAGGTGGTCGTCTCAGCTGTTTACGAGGGTGGAGCTGCTGAGCGGCACGGTGGCA TTGTGAAAGGGGATGAGGTCATGGCCATCAATGGCAAGATCATAACAGACTACACCCTGG CTGAGGCTGAGGCCGCCCTGCAGAAGGCCTGGAATCAGGGGGACTGGATTGACCTTGTTA TTGCCGTCTGTCCCCCCAAGGAGTATGACGATGAGCTGACTTTCTTCTGAAATCCAGAGG AGAAACCAATTCACCCCTAAAAGCCAGAGAACTCTGGACCCAGCCTCCTGAACACCATGC CTAGAAGCAGCCGTGAGAGACAGCAGCCTACAGGCACCCCCAGGAACCCCAAAGCTGGCA CTCAAGGATGGCAAACTCCCTTGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 21-147, gnl|bosTau2|chr15 (20575865-20575991) | |
| 21-147, gnl|Hg17|chr11 (17499116-17498990) | |
| 21-147, gnl|Mm7|chr7 (42395656-42395530) | |
| 414-522, gnl|bosTau2|chr15 (20597299-20597408) | |
| 414-522, gnl|canFam2|chr21 (43250829-43250996) | |
| 414-522, gnl|echTel1|scaffold_188246 (7614-7449) | |
| 414-522, gnl|fr1|chrUn (6815139-6815294) | |
| 414-522, gnl|hg17|chr11 (17476265-17476435) | |
| 414-522, gnl|Hg17|chr11 (17476395-17476284) | |
| 414-522, gnl|loxAfr1|scaffold_84181 (5949-5785) | |
| 414-522, gnl|mm7|chr7 (42374568-42374737) | |
| 414-522, gnl|Mm7|chr7 (42374697-42374586) | |
| 414-522, gnl|monDom2|scaffold_10 (54438473-54438326) | |
| 414-522, gnl|oryCun1|scaffold_212173 (46920-47091) | |
| 414-522, gnl|panTro1|chr9 (17659772-17659942) | |
| 414-522, gnl|rheMac2|chr14 (54439749-54439579) | |
| 414-522, gnl|rn3|chr1 (96801300-96801466) | |
| 414-522, gnl|tetNig1|chr13 (6313812-6313934) | |
| 414-522, gnl|xenTro1|scaffold_1372 (93017-92871) | |
| 578-741, gnl|bosTau2|chr15 (20600917-20601077) | |
| 578-741, gnl|Hg17|chr11 (17472499-17472327) | |
| 578-741, gnl|Mm7|chr7 (42371968-42371831) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-147, gnl|bosTau2|chr15 (20575865-20575991) | |
| 21-147, gnl|Hg17|chr11 (17499116-17498990) | |
| 21-147, gnl|Mm7|chr7 (42395656-42395530) | |
| 414-522, gnl|bosTau2|chr15 (20597299-20597408) | |
| 414-522, gnl|canFam2|chr21 (43250829-43250996) | |
| 414-522, gnl|echTel1|scaffold_188246 (7614-7449) | |
| 414-522, gnl|fr1|chrUn (6815139-6815294) | |
| 414-522, gnl|hg17|chr11 (17476265-17476435) | |
| 414-522, gnl|Hg17|chr11 (17476395-17476284) | |
| 414-522, gnl|loxAfr1|scaffold_84181 (5949-5785) | |
| 414-522, gnl|mm7|chr7 (42374568-42374737) | |
| 414-522, gnl|Mm7|chr7 (42374697-42374586) | |
| 414-522, gnl|monDom2|scaffold_10 (54438473-54438326) | |
| 414-522, gnl|oryCun1|scaffold_212173 (46920-47091) | |
| 414-522, gnl|panTro1|chr9 (17659772-17659942) | |
| 414-522, gnl|rheMac2|chr14 (54439749-54439579) | |
| 414-522, gnl|rn3|chr1 (96801300-96801466) | |
| 414-522, gnl|tetNig1|chr13 (6313812-6313934) | |
| 414-522, gnl|xenTro1|scaffold_1372 (93017-92871) | |
| 578-741, gnl|bosTau2|chr15 (20600917-20601077) | |
| 578-741, gnl|Hg17|chr11 (17472499-17472327) | |
| 578-741, gnl|Mm7|chr7 (42371968-42371831) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.296765) | |
| nje (0.16592) | |
| med (0.116252) |