Non-Coding RNA Search

Ss1.1-rmed25c_b11.5

Sequence:


               
               CGGTGCTGCGTGTCTGGGATGCTTTCCTTAGTGAGGGTGTAAAAGTGCTGTTCCGTGTGG
GGTTGACGCTGGTGCGCCTGGCACTGGGTGCCACCGAACAGCGCCTGGCCTGTCCGGGGC
TCCTGGAGACGCTCAGTGCCCTTCGAGCCATCCCCCCCGCCCAGCTGCAGGAGGAGGTCT
TCATGCCCCAGGTGCACAGCGTGGCCCTGTCCGAACAGGACCTGCAGCGGGAGATCAAGG
CCCAGCTGGCCCAGCTGCCGCCCCCGAGGCCCCAGGCCCGCCTGGCCGGGGCCCAAGCCA
TCTTTGAGGCCCAGCAGCTGGCAGGAACTCAGGGAGCCGCCCGGCCCGAGGTGCCCCGCA
TCGTGGTGCAACCCCCGGAAGAGCCCAGGCCACCACGGCGCAAGCCCCAGACCCGAGGCA
AGACTTTCCACGGGCTGCTGACTCGGTCCAGGGGCCCCCCAATCGAGAGTCCCACCAGGT
CCCATCGAAGCTCCACCTCCTTCCTGGACACCCGATTCTGAAGGCCCCACTTCTGAGGGT
ACCACAGACTCCATGTCCTGCAACCCAATTGCCTGAACAGTTGATGCCAGTCTGGAGTGG
GCACCGCACTTTACCGCTGGGATATGAGGCCTGAGCTCCCTTCGCATGAGCTGTGTCAGC
CACAAGGATGAAGGAAGGTCCCAGAAAGTGAGGTTTCAGGGACCCAGGTCAAACCGCCCA
CCCATGGAGCTGTCCTGGTGCCTGGGCCCTTGCAAAGGTCAAGCTGGAGCTGAAGGAGTG
CGGGGTAAGGGCACAGGCTCGGCTAGGGGACCCCAAAAGGCTCCTGGGGGGCCTGGAATA
AAGTCTGAGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGTGCTGCGTGTCTGGGATGCTTTCCTTAGTGAGGGTGTAAAAGTGCTGTTCCGTGTGG
GGTTGACGCTGGTGCGCCTGGCACTGGGTGCCACCGAACAGCGCCTGGCCTGTCCGGGGC
TCCTGGAGACGCTCAGTGCCCTTCGAGCCATCCCCCCCGCCCAGCTGCAGGAGGAGGTCT
TCATGCCCCAGGTGCACAGCGTGGCCCTGTCCGAACAGGACCTGCAGCGGGAGATCAAGG
CCCAGCTGGCCCAGCTGCCGCCCCCGAGGCCCCAGGCCCGCCTGGCCGGGGCCCAAGCCA
TCTTTGAGGCCCAGCAGCTGGCAGGAACTCAGGGAGCCGCCCGGCCCGAGGTGCCCCGCA
TCGTGGTGCAACCCCCGGAAGAGCCCAGGCCACCACGGCGCAAGCCCCAGACCCGAGGCA
AGACTTTCCACGGGCTGCTGACTCGGTCCAGGGGCCCCCCAATCGAGAGTCCCACCAGGT
CCCATCGAAGCTCCACCTCCTTCCTGGACACCCGATTCTGAAGGCCCCACTTCTGAGGGT
ACCACAGACTCCATGTCCTGCAACCCAATTGCCTGAACAGTTGATGCCAGTCTGGAGTGG
GCACCGCACTTTACCGCTGGGATATGAGGCCTGAGCTCCCTTCGCATGAGCTGTGTCAGC
CACAAGGATGAAGGAAGGTCCCAGAAAGTGAGGTTTCAGGGACCCAGGTCAAACCGCCCA
CCCATGGAGCTGTCCTGGTGCCTGGGCCCTTGCAAAGGTCAAGCTGGAGCTGAAGGAGTG
CGGGGTAAGGGCACAGGCTCGGCTAGGGGACCCCAAAAGGCTCCTGGGGGGCCTGGAATA
AAGTCTGAGCAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               36-194, gnl|bosTau2|chr29 (39760459-39760301)
               

               
               36-194, gnl|Hg17|chr11 (66933025-66933183)
               

               
               36-194, gnl|Mm7|chr19 (4080313-4080155)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-194, gnl|bosTau2|chr29 (39760459-39760301)
               

               
               36-194, gnl|Hg17|chr11 (66933025-66933183)
               

               
               36-194, gnl|Mm7|chr19 (4080313-4080155)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               ill (0.351185)
               

               
               med (0.116252)
               

               
               jej (0.0989218)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.351185)
               

               
               med (0.116252)
               

               
               jej (0.0989218)

	36-194, gnl\|bosTau2\|chr29 (39760459-39760301)
	36-194, gnl\|Hg17\|chr11 (66933025-66933183)
	36-194, gnl\|Mm7\|chr19 (4080313-4080155)