Non-Coding RNA Search

Ss1.1-rmed25c_p8.5

Sequence:


               
               ACACTCTAGGTCGTGTACAGGGTACCCAGGCCTGTAGTTCAGTGAACGACTAGAGTAGTT
CAACGTACTTTTTCTGAGAGAGTTGGACTGCCAGATGAGGGACAACTTTGGTTGAGAAAC
TGCCTATAAACTAACTTAGTAGGTATAGGATCTCTCATCATTTCTACCCTTCATTGGAGA
ATACCTTTAGAGACTAATTTCCCAAATGTCTGCTTAAAGAAGAATTCTGGAGTTGTCCTT
CCTCTTCTAGTTGAGACATCACAGAGGCTTGAAGCTAGATTATCATCAGCATACAGCTAA
CACAGTTGTTTGTTCTCAGTAAGCCTTACTGTGTAATGCTATTACTTTTTCAGGGTGTTG
CAGAGGTAGGATGAGTGAGAAACAATCTGGATAACATGAAAGTGATGCTGGTGGCTAAGA
GAAAGCGACTTGATTCTGTGGGAAGGGCTATAGCTGATCCATCTGTTTTCTAGATTTGAG
TATGAGCACAGTTGAAGAGGATTCTGACACAGTAACAGTAGAAACTGTGAACTCTGTGAC
CTTGACTCGGGACACAGACGGGAACCTCATTCTTCATTGCCCTCAGAATGTTTCAGAGAA
TGATCAGAGCTTTGAGGTGACCATGACTGCAACCACAGAGGTGGCAGATGATGAGATTAC
TGAGGGAACTGTGACACAGATCCAGATTCTACAGAATGAGCAAATAGATGAAATATCTCC
CTTGGGTAATGAGGAAGTTTCAGCCGTTAGCCAAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACTCTAGGTCGTGTACAGGGTACCCAGGCCTGTAGTTCAGTGAACGACTAGAGTAGTT
CAACGTACTTTTTCTGAGAGAGTTGGACTGCCAGATGAGGGACAACTTTGGTTGAGAAAC
TGCCTATAAACTAACTTAGTAGGTATAGGATCTCTCATCATTTCTACCCTTCATTGGAGA
ATACCTTTAGAGACTAATTTCCCAAATGTCTGCTTAAAGAAGAATTCTGGAGTTGTCCTT
CCTCTTCTAGTTGAGACATCACAGAGGCTTGAAGCTAGATTATCATCAGCATACAGCTAA
CACAGTTGTTTGTTCTCAGTAAGCCTTACTGTGTAATGCTATTACTTTTTCAGGGTGTTG
CAGAGGTAGGATGAGTGAGAAACAATCTGGATAACATGAAAGTGATGCTGGTGGCTAAGA
GAAAGCGACTTGATTCTGTGGGAAGGGCTATAGCTGATCCATCTGTTTTCTAGATTTGAG
TATGAGCACAGTTGAAGAGGATTCTGACACAGTAACAGTAGAAACTGTGAACTCTGTGAC
CTTGACTCGGGACACAGACGGGAACCTCATTCTTCATTGCCCTCAGAATGTTTCAGAGAA
TGATCAGAGCTTTGAGGTGACCATGACTGCAACCACAGAGGTGGCAGATGATGAGATTAC
TGAGGGAACTGTGACACAGATCCAGATTCTACAGAATGAGCAAATAGATGAAATATCTCC
CTTGGGTAATGAGGAAGTTTCAGCCGTTAGCCAAGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|34854039|ref|XP_342628.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|34854039|ref|XP_342628.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               355-480, gnl|bosTau2|chr1 (102338859-102338732)
               

               
               355-480, gnl|Hg17|chr7 (86437463-86437584)
               

               
               355-480, gnl|Mm7|chr5 (9189295-9189171)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               355-480, gnl|bosTau2|chr1 (102338859-102338732)
               

               
               355-480, gnl|Hg17|chr7 (86437463-86437584)
               

               
               355-480, gnl|Mm7|chr5 (9189295-9189171)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               med (0.116252)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	355-480, gnl\|bosTau2\|chr1 (102338859-102338732)
	355-480, gnl\|Hg17\|chr7 (86437463-86437584)
	355-480, gnl\|Mm7\|chr5 (9189295-9189171)