Non-Coding RNA Search

Ss1.1-rmed26c_h20.5

Sequence:


               
               GCCTGATCCATCTCTGGTGCTGCCTCTCCTTCCCATTTCAAGCTTCCCCTCCCGCAGTGC
AGTCTTCCAGCAGCAGCCCGAGAACTGTTCGCCTCCTCCCAACGTGGCACTAACGTGCTT
GGGGATCCAGCAGCCTCCCCAGTCGCAGCAGGTGACCATCCAAGTGCAGGAGCCTGTTGA
CATGCTCAGCAGCATGCCCGGGACAGCTGCGGGCTCTGCTGGCCGAGGCGTCTCTGTCAG
CCCCAGTGCCAGTCAGGTTCAGATGCAGCACCGGACCAACCTGATAGCCGCCTTCAGCTA
TGGACACCGGCCCTTGTCCAAGCAGCTGAGTGCCGACAGTGCAGAGGCCCACAGCTTGAA
CGTGAATCGGTTCTCCCCTGCTAACTACGACCAGGCGCATTTACACCCCCATCTGTTTTC
GGACCAGTCCCGGGGTTCCCCCAGCAGCTACAGCCCTCCGACAGGAGTGGGGTTCCCTCC
AACCCAAGCCCTGAAAGTCCCTCCGCTTGACCAGTTCCCCACCTTCCCTCCCAGTGCGCA
TCCGCAGTCACCGCACTACACCACGTCAGCGCTGCAGCAGGCCCTGCTGTCCCCCACGCC
GCCAGACTACACGAGACACCAGCAGGTCCCCCACATCCTCCAAGGACTGCTCTCTCCCCG
GCACTCGCTCACCGGCCACTCGGACATTCGGCTGCCCCCGGCCGAGTTTGCACAGCTCAT
TAAAAGGCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAAGAGTACCAAGAACT
GTTGAGGCACATGAACCAGGGGGACGCCGGGAGTCTGGCTCCGGGTCTCGGGGGACAGAG
CATGACAGAGCGCCAGGCTTTACCATATCAAAATGCTGACTCTTACCACCACCACCACCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTGATCCATCTCTGGTGCTGCCTCTCCTTCCCATTTCAAGCTTCCCCTCCCGCAGTGC
AGTCTTCCAGCAGCAGCCCGAGAACTGTTCGCCTCCTCCCAACGTGGCACTAACGTGCTT
GGGGATCCAGCAGCCTCCCCAGTCGCAGCAGGTGACCATCCAAGTGCAGGAGCCTGTTGA
CATGCTCAGCAGCATGCCCGGGACAGCTGCGGGCTCTGCTGGCCGAGGCGTCTCTGTCAG
CCCCAGTGCCAGTCAGGTTCAGATGCAGCACCGGACCAACCTGATAGCCGCCTTCAGCTA
TGGACACCGGCCCTTGTCCAAGCAGCTGAGTGCCGACAGTGCAGAGGCCCACAGCTTGAA
CGTGAATCGGTTCTCCCCTGCTAACTACGACCAGGCGCATTTACACCCCCATCTGTTTTC
GGACCAGTCCCGGGGTTCCCCCAGCAGCTACAGCCCTCCGACAGGAGTGGGGTTCCCTCC
AACCCAAGCCCTGAAAGTCCCTCCGCTTGACCAGTTCCCCACCTTCCCTCCCAGTGCGCA
TCCGCAGTCACCGCACTACACCACGTCAGCGCTGCAGCAGGCCCTGCTGTCCCCCACGCC
GCCAGACTACACGAGACACCAGCAGGTCCCCCACATCCTCCAAGGACTGCTCTCTCCCCG
GCACTCGCTCACCGGCCACTCGGACATTCGGCTGCCCCCGGCCGAGTTTGCACAGCTCAT
TAAAAGGCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAAGAGTACCAAGAACT
GTTGAGGCACATGAACCAGGGGGACGCCGGGAGTCTGGCTCCGGGTCTCGGGGGACAGAG
CATGACAGAGCGCCAGGCTTTACCATATCAAAATGCTGACTCTTACCACCACCACCACCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|48257259|gb|AAH35583.3|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|48257259|gb|AAH35583.3|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               352-898, gnl|bosTau2|chr15 (13166749-13167280)
               

               
               352-898, gnl|Hg17|chr11 (116234628-116234079)
               

               
               352-898, gnl|Mm7|chr9 (46169790-46170342)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               352-898, gnl|bosTau2|chr15 (13166749-13167280)
               

               
               352-898, gnl|Hg17|chr11 (116234628-116234079)
               

               
               352-898, gnl|Mm7|chr9 (46169790-46170342)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	352-898, gnl\|bosTau2\|chr15 (13166749-13167280)
	352-898, gnl\|Hg17\|chr11 (116234628-116234079)
	352-898, gnl\|Mm7\|chr9 (46169790-46170342)