Non-Coding RNA Search

Ss1.1-rmed26c_h5.5

Sequence:


               
               TGCCAGAACTGCAGGGACTTTTCCCAGGTCAACAGCCCCTGGTCATGGTGGCAGAGGTAG
GTTGGGCTTTGAACCAGGGGAGAAGGTAAAGACGTTACTCGGTTTGGGGGAGCAGGTAGA
GGGCCTTCTTCCATCCCTGACTAGTTCCTGGGCCCCCAGATCTGATTGCCTTCATCGAAG
GAAGCAGACGCTCACCACGCTACACCCTCTGGTTCTGCATGGGGCAGTCGTGGCCTCAGG
ACGAGCCGTGGGTCAAGAGGCTGGTGATGGTCAAGGTTGTCCCCATGTGTCTCCGGGCCC
TGGTAGACATGGCGCGGGACGGGGGCGCCTCCTCCCTGGAGAACACGGTGGACCTGCACA
TTTCCAACAGCCACCCGCTCTCCCTCACCTCCGACCAGTACAAGGCCTGCCTCCGGGACC
TGGTGGAGGACATGGATTTCTAGGCCGCTGGGAGGCCCGGGCCCTTGCCCTTCACCTCGA
CCAATAAACGGCTTCTTGCCACGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCCAGAACTGCAGGGACTTTTCCCAGGTCAACAGCCCCTGGTCATGGTGGCAGAGGTAG
GTTGGGCTTTGAACCAGGGGAGAAGGTAAAGACGTTACTCGGTTTGGGGGAGCAGGTAGA
GGGCCTTCTTCCATCCCTGACTAGTTCCTGGGCCCCCAGATCTGATTGCCTTCATCGAAG
GAAGCAGACGCTCACCACGCTACACCCTCTGGTTCTGCATGGGGCAGTCGTGGCCTCAGG
ACGAGCCGTGGGTCAAGAGGCTGGTGATGGTCAAGGTTGTCCCCATGTGTCTCCGGGCCC
TGGTAGACATGGCGCGGGACGGGGGCGCCTCCTCCCTGGAGAACACGGTGGACCTGCACA
TTTCCAACAGCCACCCGCTCTCCCTCACCTCCGACCAGTACAAGGCCTGCCTCCGGGACC
TGGTGGAGGACATGGATTTCTAGGCCGCTGGGAGGCCCGGGCCCTTGCCCTTCACCTCGA
CCAATAAACGGCTTCTTGCCACGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|2149471|gb|AAC68818.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|2149471|gb|AAC68818.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               274-504, gnl|bosTau2|chr18 (48747456-48747225)
               

               
               274-504, gnl|Hg17|chr19 (54854904-54854641)
               

               
               274-504, gnl|Mm7|chr7 (41177890-41178112)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               274-504, gnl|bosTau2|chr18 (48747456-48747225)
               

               
               274-504, gnl|Hg17|chr19 (54854904-54854641)
               

               
               274-504, gnl|Mm7|chr7 (41177890-41178112)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               cag (0.302389)
               

               
               fhi (0.169578)
               

               
               cje (0.165235)
               

               
               cov (0.132153)
               

               
               med (0.116252)
               

               
               jej (0.0989218)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.302389)
               

               
               fhi (0.169578)
               

               
               cje (0.165235)
               

               
               cov (0.132153)
               

               
               med (0.116252)
               

               
               jej (0.0989218)

	274-504, gnl\|bosTau2\|chr18 (48747456-48747225)
	274-504, gnl\|Hg17\|chr19 (54854904-54854641)
	274-504, gnl\|Mm7\|chr7 (41177890-41178112)

	cag (0.302389)
	fhi (0.169578)
	cje (0.165235)
	cov (0.132153)
	med (0.116252)
	jej (0.0989218)