Non-Coding RNA Search

Ss1.1-rmed27c_o14.5

Sequence:


               
               ACATAAACTATGTGCCCTGTGAATTTCTGGGGACTGAATTTGAAATTGCTCCTGCCAACC
GTTTGTGGCCTGGCGTGTATCTGAATGCCTGAATATCTCCCCGCTGAATGAATTTCGTAT
TCTGCCCTGAATTCACTCGGGTATATTGATTGGCTGGATGATCTTGGTGCCGCCCACTTG
ACGTTTCCAGAAGAGTCACCGAAGGAAAAGAACCAGGAGTGTAGAGGATGATGAGGAGGG
TCACCTGATCTGTCAGAGTGGAGACGTACTAAGTGCAAGATGTATATAGAATATTTTTCA
ACACTTATTAACTTTTCAGATAACATAATCTATAATTTAGATTAAGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATAAACTATGTGCCCTGTGAATTTCTGGGGACTGAATTTGAAATTGCTCCTGCCAACC
GTTTGTGGCCTGGCGTGTATCTGAATGCCTGAATATCTCCCCGCTGAATGAATTTCGTAT
TCTGCCCTGAATTCACTCGGGTATATTGATTGGCTGGATGATCTTGGTGCCGCCCACTTG
ACGTTTCCAGAAGAGTCACCGAAGGAAAAGAACCAGGAGTGTAGAGGATGATGAGGAGGG
TCACCTGATCTGTCAGAGTGGAGACGTACTAAGTGCAAGATGTATATAGAATATTTTTCA
ACACTTATTAACTTTTCAGATAACATAATCTATAATTTAGATTAAGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-331, gnl|bosTau2|chr16 (14588826-14589152)
               

               
               1-331, gnl|Hg17|chr5 (177977228-177976902)
               

               
               1-331, gnl|Mm7|chr11 (51229648-51229974)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-331, gnl|bosTau2|chr16 (14588826-14589152)
               

               
               1-331, gnl|Hg17|chr5 (177977228-177976902)
               

               
               1-331, gnl|Mm7|chr11 (51229648-51229974)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               ece (0.229305)
               

               
               fli (0.202881)
               

               
               nep (0.183925)
               

               
               liv (0.146284)
               

               
               med (0.116252)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               fli (0.202881)
               

               
               nep (0.183925)
               

               
               liv (0.146284)
               

               
               med (0.116252)

	1-331, gnl\|bosTau2\|chr16 (14588826-14589152)
	1-331, gnl\|Hg17\|chr5 (177977228-177976902)
	1-331, gnl\|Mm7\|chr11 (51229648-51229974)

	ece (0.229305)
	fli (0.202881)
	nep (0.183925)
	liv (0.146284)
	med (0.116252)