Ss1.1-rmed28c_i17.5
|
CCAAAGCCACCTTCTGCCCAGATGCCATTTATGGGAGGCTTCTGCTCCTACACCTGGTCT
CCAGCTAATAATATGCATTTTATTTAGGATGGACAGATATTTTCTTAAACGGACGAGTTT
CCCCATCCTTGGGGCTTCTTAGGAGGCCAGATAAGAAGGGAGAGGGCCAAGATTCCTGTT
GAAAACTTGTCCACTGCCTGTGACCCGCCCCTCCAGAGTAGGTGTTCCAGGGAAGGATGT
GGCTGGGGACCTTTCTGCTGGTGACTGGTGGTCAGTGGGGCACTTTGAGGCCATTGGGAT
ATCTTAGGATGACACGCACCCAGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCAAAGCCACCTTCTGCCCAGATGCCATTTATGGGAGGCTTCTGCTCCTACACCTGGTCT
CCAGCTAATAATATGCATTTTATTTAGGATGGACAGATATTTTCTTAAACGGACGAGTTT
CCCCATCCTTGGGGCTTCTTAGGAGGCCAGATAAGAAGGGAGAGGGCCAAGATTCCTGTT
GAAAACTTGTCCACTGCCTGTGACCCGCCCCTCCAGAGTAGGTGTTCCAGGGAAGGATGT
GGCTGGGGACCTTTCTGCTGGTGACTGGTGGTCAGTGGGGCACTTTGAGGCCATTGGGAT
ATCTTAGGATGACACGCACCCAGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
205-305, + strand, RNAmicro p=0.999252 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
205-305, + strand, RNAmicro p=0.999252 |
|
6-307, gnl|bosTau2|chr8 (57545839-57545525) |
|
6-307, gnl|canFam2|chr11 (71592012-71592703) |
|
6-307, gnl|dasNov1|scaffold_8909 (9064-8456) |
|
6-307, gnl|echTel1|scaffold_122874 (13-664) |
|
6-307, gnl|hg17|chr9 (114178150-114178822) |
|
6-307, gnl|Hg17|chr9 (114178643-114178337) |
|
6-307, gnl|loxAfr1|scaffold_30090 (6705-6006) |
|
6-307, gnl|mm7|chr4 (62801040-62801680) |
|
6-307, gnl|Mm7|chr4 (62801523-62801222) |
|
6-307, gnl|monDom2|scaffold_38 (4194303-4195018) |
|
6-307, gnl|oryCun1|scaffold_214303 (219063-219662) |
|
6-307, gnl|panTro1|chr11 (98711988-98712665) |
|
6-307, gnl|rheMac2|chr15 (21791153-21790460) |
|
6-307, gnl|rn3|chr5 (80334757-80335411) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-307, gnl|bosTau2|chr8 (57545839-57545525) |
|
6-307, gnl|canFam2|chr11 (71592012-71592703) |
|
6-307, gnl|dasNov1|scaffold_8909 (9064-8456) |
|
6-307, gnl|echTel1|scaffold_122874 (13-664) |
|
6-307, gnl|hg17|chr9 (114178150-114178822) |
|
6-307, gnl|Hg17|chr9 (114178643-114178337) |
|
6-307, gnl|loxAfr1|scaffold_30090 (6705-6006) |
|
6-307, gnl|mm7|chr4 (62801040-62801680) |
|
6-307, gnl|Mm7|chr4 (62801523-62801222) |
|
6-307, gnl|monDom2|scaffold_38 (4194303-4195018) |
|
6-307, gnl|oryCun1|scaffold_214303 (219063-219662) |
|
6-307, gnl|panTro1|chr11 (98711988-98712665) |
|
6-307, gnl|rheMac2|chr15 (21791153-21790460) |
|
6-307, gnl|rn3|chr5 (80334757-80335411) |
|
cag (0.302389) |
|
cly (0.241284) |
|
med (0.116252) |
|
cag (0.302389) |
|
cly (0.241284) |
|
med (0.116252) |