Non-Coding RNA Search

Ss1.1-rmed32c_d10.5

Sequence:


               
               TGCGCACGATGAGGCTGCTGGCATTCGTGGTGTTGACTCTCTTTGCTGTCACTCAAGCAG
AAGAAGGAGCCAGGCTTTGGGCCTCCAAATCACTGCTGAACAGATATGCTGTGGAGGGGC
GAGACTTGACCTTACAGTACAACATCTACAATGTTGGCTCAAGTGCTGCATTAGATGTGG
AACTCTCTGATGATTCTTTCCCTCCAGAAGACTTGGGCATGGTCTCTGGAATGCTCAATG
TCAAATGGGACCGGATGGCTCCTGCTAGCAATGTGTCCCACACCGTGGTCCTGCGCCCTC
TCAAGGCTGGTTATTTCAACTTCACCTCAGCAACTATTACTTACCTGGCCCAGGAGGATG
GGCCTGTTGTGATGGGCTTCACCAGTGCACCTGGACAGGGGGGAATCCTGGCTCAGCGGG
AGTTTGATAGGAGATTCTCCCCCCATTTTCTGGACTGGGCAGCCTTCGGAGTCATGACCC
TCCCTTCCATCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCGCACGATGAGGCTGCTGGCATTCGTGGTGTTGACTCTCTTTGCTGTCACTCAAGCAG
AAGAAGGAGCCAGGCTTTGGGCCTCCAAATCACTGCTGAACAGATATGCTGTGGAGGGGC
GAGACTTGACCTTACAGTACAACATCTACAATGTTGGCTCAAGTGCTGCATTAGATGTGG
AACTCTCTGATGATTCTTTCCCTCCAGAAGACTTGGGCATGGTCTCTGGAATGCTCAATG
TCAAATGGGACCGGATGGCTCCTGCTAGCAATGTGTCCCACACCGTGGTCCTGCGCCCTC
TCAAGGCTGGTTATTTCAACTTCACCTCAGCAACTATTACTTACCTGGCCCAGGAGGATG
GGCCTGTTGTGATGGGCTTCACCAGTGCACCTGGACAGGGGGGAATCCTGGCTCAGCGGG
AGTTTGATAGGAGATTCTCCCCCCATTTTCTGGACTGGGCAGCCTTCGGAGTCATGACCC
TCCCTTCCATCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62751819|ref|NP_001015533.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62751819|ref|NP_001015533.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-490, gnl|bosTau2|chr16 (13483134-13482645)
               

               
               1-490, gnl|Hg17|chr1 (152803030-152792474)
               

               
               1-490, gnl|Mm7|chr3 (88693682-88701722)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-490, gnl|bosTau2|chr16 (13483134-13482645)
               

               
               1-490, gnl|Hg17|chr1 (152803030-152792474)
               

               
               1-490, gnl|Mm7|chr3 (88693682-88701722)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               med (0.232504)
               

               
               mcp (0.170648)
               

               
               cov (0.132153)
               

               
               cly (0.120642)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.232504)
               

               
               mcp (0.170648)
               

               
               cov (0.132153)
               

               
               cly (0.120642)

	1-490, gnl\|bosTau2\|chr16 (13483134-13482645)
	1-490, gnl\|Hg17\|chr1 (152803030-152792474)
	1-490, gnl\|Mm7\|chr3 (88693682-88701722)