Ss1.1-rmed32c_e18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGTCAGAGAATTGATGTTAAGGTACCAGCATGGACTGGAATTTGGGAAATCCTGTTTGA AAACCGAATTGCAATTTTCAGACTATTACTGTCTCCTTGCTGTCCATGTGCTTATTGATA TATGGAGAGAAACAGGTGATGAGACCACTGTGTGGCAGGCCCTGACTTTGTTGGAAGAGG GATTAACCCACAGCCCTTCCAATGCTCAATTCAAATTGCTGCTTGTTCGAATCTACTGTA TGCTGGGGGCATTTGAACCAGTGGTGGATCTGTACTCTAGCCTTGATGCTAAGCATATCC AGCATGACACCATTGGTTATCTTTTGACTCGATACGCCGAATCCCTAGGTCAGTATGCTG CTGCATCCCAATCCTGTAACTTCGCGCTCAGGTTTTTCCACTCCAACCAGAAAGATATAC TGCAGGCAAACAGCTCGCCGAGGTGTCCCATGGGGGTTTAAAAGCCGCATCGAATGCAGT TGAATTAGCGCCCGTGGCGCAATCCCGCGGCCTGAAATGAACCCTGCGAGGCTGTGTATC AGAGGACCTCAGAATATATTATTCAAGCTTACAAATATGGTGCATTTGAGAAGATCCCAG AGTTTATCGCTTTTAGGAACAGGCTGAATAATTCCCTTCATTTTGCACAAGTCCGTACTG AAAGGATGTTGTTAGACCTTCTACTTGAAGCAAATATATCAACCAGCTTAGCAGAAAGTA TAAAGTCAATGAATCTTCGGCCAGAAGAAGATGACATTCCATGGGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGTCAGAGAATTGATGTTAAGGTACCAGCATGGACTGGAATTTGGGAAATCCTGTTTGA AAACCGAATTGCAATTTTCAGACTATTACTGTCTCCTTGCTGTCCATGTGCTTATTGATA TATGGAGAGAAACAGGTGATGAGACCACTGTGTGGCAGGCCCTGACTTTGTTGGAAGAGG GATTAACCCACAGCCCTTCCAATGCTCAATTCAAATTGCTGCTTGTTCGAATCTACTGTA TGCTGGGGGCATTTGAACCAGTGGTGGATCTGTACTCTAGCCTTGATGCTAAGCATATCC AGCATGACACCATTGGTTATCTTTTGACTCGATACGCCGAATCCCTAGGTCAGTATGCTG CTGCATCCCAATCCTGTAACTTCGCGCTCAGGTTTTTCCACTCCAACCAGAAAGATATAC TGCAGGCAAACAGCTCGCCGAGGTGTCCCATGGGGGTTTAAAAGCCGCATCGAATGCAGT TGAATTAGCGCCCGTGGCGCAATCCCGCGGCCTGAAATGAACCCTGCGAGGCTGTGTATC AGAGGACCTCAGAATATATTATTCAAGCTTACAAATATGGTGCATTTGAGAAGATCCCAG AGTTTATCGCTTTTAGGAACAGGCTGAATAATTCCCTTCATTTTGCACAAGTCCGTACTG AAAGGATGTTGTTAGACCTTCTACTTGAAGCAAATATATCAACCAGCTTAGCAGAAAGTA TAAAGTCAATGAATCTTCGGCCAGAAGAAGATGACATTCCATGGGAAG |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 134-316, gnl|bosTau2|chr17 (36874783-36874601) | |
| 134-316, gnl|canFam2|chr26 (12665237-12665447) | |
| 134-316, gnl|danRer3|chrNA (218966530-218966322) | |
| 134-316, gnl|dasNov1|scaffold_134056 (3495-3705) | |
| 134-316, gnl|echTel1|scaffold_318758 (2307-2097) | |
| 134-316, gnl|fr1|chrUn (28724771-28724964) | |
| 134-316, gnl|galGal2|chr15 (6224929-6225134) | |
| 134-316, gnl|hg17|chr12 (110954907-110955114) | |
| 134-316, gnl|Hg17|chr12 (110955094-110954912) | |
| 134-316, gnl|loxAfr1|scaffold_7322 (64369-64159) | |
| 134-316, gnl|mm7|chr5 (120660144-120659940) | |
| 134-316, gnl|Mm7|chr5 (120659955-120660137) | |
| 134-316, gnl|monDom2|scaffold_110 (144257-144471) | |
| 134-316, gnl|oryCun1|scaffold_196607 (6885-7092) | |
| 134-316, gnl|panTro1|chr10 (113655444-113655651) | |
| 134-316, gnl|rheMac2|chr11 (112965161-112965368) | |
| 134-316, gnl|rn3|chr12 (36117571-36117775) | |
| 134-316, gnl|tetNig1|chrUn_random (1051545-1051744) | |
| 134-316, gnl|xenTro1|scaffold_1037 (60375-60576) | |
| 417-545, gnl|bosTau2|chr17 (36870447-36870319) | |
| 417-545, gnl|canFam2|chr26 (12660346-12660918) | |
| 417-545, gnl|dasNov1|scaffold_36066 (47224-47787) | |
| 417-545, gnl|echTel1|scaffold_318758 (7078-6521) | |
| 417-545, gnl|galGal2|chr15 (6220642-6221248) | |
| 417-545, gnl|hg17|chr12 (110949686-110950268) | |
| 417-545, gnl|Hg17|chr12 (110950135-110950007) | |
| 417-545, gnl|loxAfr1|scaffold_7322 (69425-68850) | |
| 417-545, gnl|mm7|chr5 (120663752-120663214) | |
| 417-545, gnl|Mm7|chr5 (120663319-120663447) | |
| 417-545, gnl|monDom2|scaffold_110 (138911-139490) | |
| 417-545, gnl|oryCun1|scaffold_196607 (1473-2042) | |
| 417-545, gnl|panTro1|chr10 (113650227-113650809) | |
| 417-545, gnl|rheMac2|chr11 (112959932-112960512) | |
| 417-545, gnl|rn3|chr12 (36113897-36114435) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 134-316, gnl|bosTau2|chr17 (36874783-36874601) | |
| 134-316, gnl|canFam2|chr26 (12665237-12665447) | |
| 134-316, gnl|danRer3|chrNA (218966530-218966322) | |
| 134-316, gnl|dasNov1|scaffold_134056 (3495-3705) | |
| 134-316, gnl|echTel1|scaffold_318758 (2307-2097) | |
| 134-316, gnl|fr1|chrUn (28724771-28724964) | |
| 134-316, gnl|galGal2|chr15 (6224929-6225134) | |
| 134-316, gnl|hg17|chr12 (110954907-110955114) | |
| 134-316, gnl|Hg17|chr12 (110955094-110954912) | |
| 134-316, gnl|loxAfr1|scaffold_7322 (64369-64159) | |
| 134-316, gnl|mm7|chr5 (120660144-120659940) | |
| 134-316, gnl|Mm7|chr5 (120659955-120660137) | |
| 134-316, gnl|monDom2|scaffold_110 (144257-144471) | |
| 134-316, gnl|oryCun1|scaffold_196607 (6885-7092) | |
| 134-316, gnl|panTro1|chr10 (113655444-113655651) | |
| 134-316, gnl|rheMac2|chr11 (112965161-112965368) | |
| 134-316, gnl|rn3|chr12 (36117571-36117775) | |
| 134-316, gnl|tetNig1|chrUn_random (1051545-1051744) | |
| 134-316, gnl|xenTro1|scaffold_1037 (60375-60576) | |
| 417-545, gnl|bosTau2|chr17 (36870447-36870319) | |
| 417-545, gnl|canFam2|chr26 (12660346-12660918) | |
| 417-545, gnl|dasNov1|scaffold_36066 (47224-47787) | |
| 417-545, gnl|echTel1|scaffold_318758 (7078-6521) | |
| 417-545, gnl|galGal2|chr15 (6220642-6221248) | |
| 417-545, gnl|hg17|chr12 (110949686-110950268) | |
| 417-545, gnl|Hg17|chr12 (110950135-110950007) | |
| 417-545, gnl|loxAfr1|scaffold_7322 (69425-68850) | |
| 417-545, gnl|mm7|chr5 (120663752-120663214) | |
| 417-545, gnl|Mm7|chr5 (120663319-120663447) | |
| 417-545, gnl|monDom2|scaffold_110 (138911-139490) | |
| 417-545, gnl|oryCun1|scaffold_196607 (1473-2042) | |
| 417-545, gnl|panTro1|chr10 (113650227-113650809) | |
| 417-545, gnl|rheMac2|chr11 (112959932-112960512) | |
| 417-545, gnl|rn3|chr12 (36113897-36114435) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |