Non-Coding RNA Search

Ss1.1-rmed33c_k12.5

Sequence:


               
               GTGGACGCCTGCGGCCTTGTTCGGGCAGATCTCCAGCGGCGGTGTGCGGGCGGAGGCGTG
GTGGGCGCGCGGGGATGGGGGTCACCGTGGACGTGCACGAGGTGTTCAAGTATCCCTTCG
AGCAGGTGGTCGCCAGCTTCCTCCGAAAGTATCCGAACCCCATGGATAAAAATGTCATCT
CTGTAAAAATTGTGGAGGAGAAAAGAGATGTGTCGACAGGGATCATCTATAGAAAGAGGA
TTGCAGTCTGTCAGAATGTGGTTCCAGAGATGTTAAGGAAGGTGAACATTTTAAAGGTAC
CTAATATCCAGTTAGAAGAGGAGTCATGGTTCGATCCTCAGGAAAGGAACATGGCTATAA
GGAGTCACTGCCTTACGTGGACACCGTATGCATCCATGAAGGAAGAGTCTGTTTTCCGGG
AAAGTGTGGAGAATCCGAATTGGACAGAGTTCATTCAGAAGGGCAAGATTTCCATCACAG
GGGTTGGTTTTCTCAACTGCGTTTTGGAAACTTTTGCCAGCACCTTCCTAAGACAGGGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGACGCCTGCGGCCTTGTTCGGGCAGATCTCCAGCGGCGGTGTGCGGGCGGAGGCGTG
GTGGGCGCGCGGGGATGGGGGTCACCGTGGACGTGCACGAGGTGTTCAAGTATCCCTTCG
AGCAGGTGGTCGCCAGCTTCCTCCGAAAGTATCCGAACCCCATGGATAAAAATGTCATCT
CTGTAAAAATTGTGGAGGAGAAAAGAGATGTGTCGACAGGGATCATCTATAGAAAGAGGA
TTGCAGTCTGTCAGAATGTGGTTCCAGAGATGTTAAGGAAGGTGAACATTTTAAAGGTAC
CTAATATCCAGTTAGAAGAGGAGTCATGGTTCGATCCTCAGGAAAGGAACATGGCTATAA
GGAGTCACTGCCTTACGTGGACACCGTATGCATCCATGAAGGAAGAGTCTGTTTTCCGGG
AAAGTGTGGAGAATCCGAATTGGACAGAGTTCATTCAGAAGGGCAAGATTTCCATCACAG
GGGTTGGTTTTCTCAACTGCGTTTTGGAAACTTTTGCCAGCACCTTCCTAAGACAGGGCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61831706|ref|XP_603073.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61831706|ref|XP_603073.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               147-443, gnl|bosTau2|chr9 (22724977-22724681)
               

               
               147-443, gnl|Hg17|chr5 (145179776-145177649)
               

               
               147-443, gnl|Mm7|chr18 (42315606-42310513)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               147-443, gnl|bosTau2|chr9 (22724977-22724681)
               

               
               147-443, gnl|Hg17|chr5 (145179776-145177649)
               

               
               147-443, gnl|Mm7|chr18 (42315606-42310513)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	147-443, gnl\|bosTau2\|chr9 (22724977-22724681)
	147-443, gnl\|Hg17\|chr5 (145179776-145177649)
	147-443, gnl\|Mm7\|chr18 (42315606-42310513)