Non-Coding RNA Search

Ss1.1-rmga03_k8.5

Sequence:


               
               TGTGTGTGTGTGCGCGTGCGCGCGCGTGCGGTTAAAATTAGGTCGTGTGACCAGCCGCCT
TGATCTCACCTGCAGTCGTGTTTGGAAGTGGGAATGGTTTGTCCTCTATGCCGACGACGT
GTCCAGAATTTCGTGTGCTTACTGAGAACTGTGTGTTGATGATTTCGGGAGAGGTACGTT
GTTGGACAAAGCAACCCCCTTTCTCAGCCACTGCACATCTGTTTCTGTGGAGTCAAAAGT
TCTGTGCCTCTTTTGGAATCTGAAGAATCCTGTGTCAGTCATCTGTTGCTTAAATCTGTG
AAAAACAAGTTTCTTTGGGGGGAAAGTATGCATTTATAAGTGTGTGTAGAAGCGGTGTTT
TTATTGTATTGATGTAATTGTTTTTAAGTGTTTGGTGTCTTTGTTGCAATATGAAGTTCA
TTAAAAATCCGTGTTCTGTAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGTGTGTGTGCGCGTGCGCGCGCGTGCGGTTAAAATTAGGTCGTGTGACCAGCCGCCT
TGATCTCACCTGCAGTCGTGTTTGGAAGTGGGAATGGTTTGTCCTCTATGCCGACGACGT
GTCCAGAATTTCGTGTGCTTACTGAGAACTGTGTGTTGATGATTTCGGGAGAGGTACGTT
GTTGGACAAAGCAACCCCCTTTCTCAGCCACTGCACATCTGTTTCTGTGGAGTCAAAAGT
TCTGTGCCTCTTTTGGAATCTGAAGAATCCTGTGTCAGTCATCTGTTGCTTAAATCTGTG
AAAAACAAGTTTCTTTGGGGGGAAAGTATGCATTTATAAGTGTGTGTAGAAGCGGTGTTT
TTATTGTATTGATGTAATTGTTTTTAAGTGTTTGGTGTCTTTGTTGCAATATGAAGTTCA
TTAAAAATCCGTGTTCTGTAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               3-441, gnl|bosTau2|chr13 (31308243-31307787)
               

               
               3-441, gnl|Hg17|chr10 (1167645-1168096)
               

               
               3-441, gnl|Mm7|chr13 (8682378-8681906)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-441, gnl|bosTau2|chr13 (31308243-31307787)
               

               
               3-441, gnl|Hg17|chr10 (1167645-1168096)
               

               
               3-441, gnl|Mm7|chr13 (8682378-8681906)

Expressed library(ies): 8 entry(ies)

More info

Expressed library(ies): 8 entry(ies)

Help | Less info


               
               fce (0.271592)
               

               
               cbe (0.239234)
               

               
               cmu (0.186393)
               

               
               cki (0.165235)
               

               
               mga (0.160205)
               

               
               fco (0.157208)
               

               
               thg (0.126791)
               

               
               ldo (0.0970026)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               cbe (0.239234)
               

               
               cmu (0.186393)
               

               
               cki (0.165235)
               

               
               mga (0.160205)
               

               
               fco (0.157208)
               

               
               thg (0.126791)
               

               
               ldo (0.0970026)

	3-441, gnl\|bosTau2\|chr13 (31308243-31307787)
	3-441, gnl\|Hg17\|chr10 (1167645-1168096)
	3-441, gnl\|Mm7\|chr13 (8682378-8681906)

	fce (0.271592)
	cbe (0.239234)
	cmu (0.186393)
	cki (0.165235)
	mga (0.160205)
	fco (0.157208)
	thg (0.126791)
	ldo (0.0970026)