Non-Coding RNA Search

Ss1.1-rmga05_d7.5

Sequence:


               
               GAGTGTTGGAAAGTATTTCCTTCTGAGATGGGGGTTATCTACTGATAAGGAAAGAGAAGA
ATTTATGAGAAATTGTTGAAAGAGATGGCTAACAATCTGTGAAGATTTTTTGTTTTTGTT
TCTGTTTTGTTTTTTTACTTTATACAGTCTTTATGAATATCTTAATGTTCAAAAAATGAC
TTGGTTTTTTCCTTCTTTTTTTTTATATTGGAATGAGGGATGATAAGTTAAACCCACATA
GACTCTTTAAAACTATAGGCTAGATAGGAATGTATGTTTGATTTGTTGAAGCTATAATCA
GACTATTTAAAATGTTTTTGCTATTTTTAATCTTGAAAGATTGTACTAATTTATTAGAGA
CAGATCCTATTTGGCTCTCTTCATAAAGAAAGAGCATCCCTGCTCAAATCTCCTGGGCTT
TCCCATCAATGTTTTCAAAAGATAAATCTGATTTATGCATCATTATGGTATTGCTTATTT
TTAAGTTTTCAAATATACAAAGCATGATTCTTTATACCCTTGTCTTGCAGTGATCATAAA
GTCTAGACTCTGAAGGGGCAAAAACAAGAGGAAATTTTTGTTGATTCTTTGTTTTTGGTT
TGTTGTTTGTTTTCAATGCTAATGTTTAATCCTATAGTACATAGGTGCTTATTGCTATGT
TAATATTCTAAAAGACTTTCCTGTTAGATATTAGAACCTGATCCATGGATATCTTTTTTG
TGTGATTGCTATTTTAAAAAAAGAGATGAGAAGACTCTCTGAGCTTTAAGTGCATATAGT
ACAGGATAAAGATATAAACTTAAATAACCAAATCCTGTCTGGAACAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTGTTGGAAAGTATTTCCTTCTGAGATGGGGGTTATCTACTGATAAGGAAAGAGAAGA
ATTTATGAGAAATTGTTGAAAGAGATGGCTAACAATCTGTGAAGATTTTTTGTTTTTGTT
TCTGTTTTGTTTTTTTACTTTATACAGTCTTTATGAATATCTTAATGTTCAAAAAATGAC
TTGGTTTTTTCCTTCTTTTTTTTTATATTGGAATGAGGGATGATAAGTTAAACCCACATA
GACTCTTTAAAACTATAGGCTAGATAGGAATGTATGTTTGATTTGTTGAAGCTATAATCA
GACTATTTAAAATGTTTTTGCTATTTTTAATCTTGAAAGATTGTACTAATTTATTAGAGA
CAGATCCTATTTGGCTCTCTTCATAAAGAAAGAGCATCCCTGCTCAAATCTCCTGGGCTT
TCCCATCAATGTTTTCAAAAGATAAATCTGATTTATGCATCATTATGGTATTGCTTATTT
TTAAGTTTTCAAATATACAAAGCATGATTCTTTATACCCTTGTCTTGCAGTGATCATAAA
GTCTAGACTCTGAAGGGGCAAAAACAAGAGGAAATTTTTGTTGATTCTTTGTTTTTGGTT
TGTTGTTTGTTTTCAATGCTAATGTTTAATCCTATAGTACATAGGTGCTTATTGCTATGT
TAATATTCTAAAAGACTTTCCTGTTAGATATTAGAACCTGATCCATGGATATCTTTTTTG
TGTGATTGCTATTTTAAAAAAAGAGATGAGAAGACTCTCTGAGCTTTAAGTGCATATAGT
ACAGGATAAAGATATAAACTTAAATAACCAAATCCTGTCTGGAACAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-828, gnl|bosTau2|chr5 (37957988-37957173)
               

               
               2-828, gnl|Hg17|chr12 (101294466-101293665)
               

               
               2-828, gnl|Mm7|chr10 (87493251-87494072)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-828, gnl|bosTau2|chr5 (37957988-37957173)
               

               
               2-828, gnl|Hg17|chr12 (101294466-101293665)
               

               
               2-828, gnl|Mm7|chr10 (87493251-87494072)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mga (0.32041)
               

               
               hea (0.204499)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.32041)
               

               
               hea (0.204499)

	2-828, gnl\|bosTau2\|chr5 (37957988-37957173)
	2-828, gnl\|Hg17\|chr12 (101294466-101293665)
	2-828, gnl\|Mm7\|chr10 (87493251-87494072)