Non-Coding RNA Search

Ss1.1-rmga09_a14.5

Sequence:


               
               GCTAATCAAAATCTAGTACAAAAGTTTTATATGTAGTTAACAATCCATGAAGAAGTCTAA
AGTGTCAAGAACTAAGATTATTGTCAAAATGAATGTATCACTGACAGAATCTAAGAATAT
GATTTATTATTTAAGTGTTGGTAAATTATAATCTTATAAGAGGAGGCCTCAATGGGGCAA
AAATAGCAGTTAACATACAAAACATTAATATTGTTTATTCCAAAAAACTATTGAATAAAA
ACTATTGTGTATGATTCTAAAGTAGTTTCTAAAGCAGTTTATTATACAAATAGTTATTTC
TCTTCTCATGCACAAATAGAAATGTGTATAAAGCCAAAACCACCTTTTGTGTTTATGGCC
TATCTATTCTATTTATAGAGTTGAAAGTAAAATTGTTTTAGACTCAGAGGATAGGGTAAA
CTATGCAAGTCCCCTTCCTTCATGTAAATGCCAACTGATTGACAATAAGGATGTTTAGTT
CTATAATATTATTTGTGCTATTTAATACCTTCTACTTTGAACATTATTAAATTGTATATA
CTTTTACTACTTTCCTTTTAAAATTATAGAAATTCTTCTTGAACAACACTGCCAAATGGA
AAGAAAATTTTTTTCTGAAAAATATTGTTAACATAAACTGAATGTTGGTGGTTGATTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTAATCAAAATCTAGTACAAAAGTTTTATATGTAGTTAACAATCCATGAAGAAGTCTAA
AGTGTCAAGAACTAAGATTATTGTCAAAATGAATGTATCACTGACAGAATCTAAGAATAT
GATTTATTATTTAAGTGTTGGTAAATTATAATCTTATAAGAGGAGGCCTCAATGGGGCAA
AAATAGCAGTTAACATACAAAACATTAATATTGTTTATTCCAAAAAACTATTGAATAAAA
ACTATTGTGTATGATTCTAAAGTAGTTTCTAAAGCAGTTTATTATACAAATAGTTATTTC
TCTTCTCATGCACAAATAGAAATGTGTATAAAGCCAAAACCACCTTTTGTGTTTATGGCC
TATCTATTCTATTTATAGAGTTGAAAGTAAAATTGTTTTAGACTCAGAGGATAGGGTAAA
CTATGCAAGTCCCCTTCCTTCATGTAAATGCCAACTGATTGACAATAAGGATGTTTAGTT
CTATAATATTATTTGTGCTATTTAATACCTTCTACTTTGAACATTATTAAATTGTATATA
CTTTTACTACTTTCCTTTTAAAATTATAGAAATTCTTCTTGAACAACACTGCCAAATGGA
AAGAAAATTTTTTTCTGAAAAATATTGTTAACATAAACTGAATGTTGGTGGTTGATTGGT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               54-660, gnl|bosTau2|chr4 (14997824-14997196)
               

               
               54-660, gnl|Hg17|chr7 (80017358-80016756)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-660, gnl|bosTau2|chr4 (14997824-14997196)
               

               
               54-660, gnl|Hg17|chr7 (80017358-80016756)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               ret (0.514933)
               

               
               bfe (0.299715)
               

               
               mga (0.160205)
               

               
               isp (0.150376)
               

               
               ldo (0.0970026)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.514933)
               

               
               bfe (0.299715)
               

               
               mga (0.160205)
               

               
               isp (0.150376)
               

               
               ldo (0.0970026)

	54-660, gnl\|bosTau2\|chr4 (14997824-14997196)
	54-660, gnl\|Hg17\|chr7 (80017358-80016756)

	ret (0.514933)
	bfe (0.299715)
	mga (0.160205)
	isp (0.150376)
	ldo (0.0970026)