Non-Coding RNA Search

Ss1.1-rmga09_a4.5

Sequence:


               
               GTTTATGACATTGCCAAGAAAAGGAAAACCGGCTAAAGATAGGCTAAAACAGGTCCTGTT
CAAGTATAGTGAAACTCAGTCTGAAACAGCAGGGACAAAGTCTCAGCTGGGAATAGGTGC
GGAGAGACTCCTGTGAATTTCAAAATGTTAGATGACACTTTAAGCACAGATAGTAACATC
TATGGAAATTATTATTACTCTTGTTCCAACCTGACAATAATAGTGAGAGGAAGTAATTGT
TTCTAAATAGAACTACTAGGAAAATTGTAGAATTTTCTAATTAGAAGGGCCCTAGAAATC
ACTGAACACTTGCCTATCCTCCAAACCCTGCAGAATCGCCTTGTAAAATATCCCTGACAG
CTGGACGTCTGTTCACAGTCCACCATTTACATTTAAGCCATTCTGTTTAGATTCTTTAAA
ATGGGTTCCTGGCATAGAGTAGAATCTGTCGACGCTTTTTAAAACACTTGTTTATAGTGC
AACTATAAACTTCACTTTGAACTGCTGCATAGTTTGAACTTTCAAATTCCAAATTAAAGA
AGTTTTAAAATTTTGTAAAACAGTTTAAATGTTTATTAATTGTGTACCTGTTATGTGTAC
TACAAATAATTCTGTCATTGCAGTAAAGAAACAGTCATGTCTAAAATTATTGGGCAGAAC
TTTTTACTTGGAAATCCAAATACACGAGATTTTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTATGACATTGCCAAGAAAAGGAAAACCGGCTAAAGATAGGCTAAAACAGGTCCTGTT
CAAGTATAGTGAAACTCAGTCTGAAACAGCAGGGACAAAGTCTCAGCTGGGAATAGGTGC
GGAGAGACTCCTGTGAATTTCAAAATGTTAGATGACACTTTAAGCACAGATAGTAACATC
TATGGAAATTATTATTACTCTTGTTCCAACCTGACAATAATAGTGAGAGGAAGTAATTGT
TTCTAAATAGAACTACTAGGAAAATTGTAGAATTTTCTAATTAGAAGGGCCCTAGAAATC
ACTGAACACTTGCCTATCCTCCAAACCCTGCAGAATCGCCTTGTAAAATATCCCTGACAG
CTGGACGTCTGTTCACAGTCCACCATTTACATTTAAGCCATTCTGTTTAGATTCTTTAAA
ATGGGTTCCTGGCATAGAGTAGAATCTGTCGACGCTTTTTAAAACACTTGTTTATAGTGC
AACTATAAACTTCACTTTGAACTGCTGCATAGTTTGAACTTTCAAATTCCAAATTAAAGA
AGTTTTAAAATTTTGTAAAACAGTTTAAATGTTTATTAATTGTGTACCTGTTATGTGTAC
TACAAATAATTCTGTCATTGCAGTAAAGAAACAGTCATGTCTAAAATTATTGGGCAGAAC
TTTTTACTTGGAAATCCAAATACACGAGATTTTTTC

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-696, gnl|bosTau2|chr27 (24031728-24031044)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-696, gnl|bosTau2|chr27 (24031728-24031044)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

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               gul (0.177588)
               

               
               mga (0.160205)
               

               
               cli (0.152812)
               

               
               lyg (0.133103)
               

               
               sug (0.127291)
               

               
               bla (0.124347)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               mga (0.160205)
               

               
               cli (0.152812)
               

               
               lyg (0.133103)
               

               
               sug (0.127291)
               

               
               bla (0.124347)

	gul (0.177588)
	mga (0.160205)
	cli (0.152812)
	lyg (0.133103)
	sug (0.127291)
	bla (0.124347)