Ss1.1-rmga10_p19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCACATTTGGACACACTTATAAATGAGCAAGCTTCTTATGTTTTAACTCGAGCAGGCTT GAGTTATATCTATAACACCGTGCAGCAGCATAAACCTGAACAGGGCCCGTTAGCTAATTT GCCCAACCTAGATTCTGTGGCAGTGAAAGCTGCGATGGTTCAGTTTGATCGCTATCTCTC AGCCCCAGACCACCTGTTAATGCCACAGCTGAACTTTCTTCTGAGTGCCACAGTGAAAGA GCAGATCATAAAACAGTCTACAGACCTAGTCTGCAGAGCCTATGGTGAAGTGTACACAGC TGTGATGAATCCGGTCAATGAGTACAAAGACCCCGAGAGCGTTCTGCACCGATCGCCACA GCAAGTGCAGACTCTTCTCTCCTGATTGTCGTCTTCGAACGTTTTAGCAAAATACTGCAT TCCTAAAACACTGAAGGTTTTCTTGGTTTTTAGTCTGTTAATCTTTGAAATTTGATGGTT ACAGTTTCTTTGTAGCATAAGAATGCAGGTCCCAATAATTGCTTTGCCTTAGTCACAGTA ATGTGGAGGTAACGTGCTGACCTGAGTTGGTGTTGCTCTCTGTTGGCTCTCCTCGTGAAC GTTTATTCTCAACTAGCCCTCTCTCCAGCTCAGCAGTGTCCCTTCGTTCTGGAATATGGT GTAATGGGAAAAGAGAAGTGTGAGAAGTTTGGGGGATTTTTTTTTTTTTAACAAGATAGT TCTTGTAAGAAACTGCATTAAAAATTTATTTAAAGCTAAGAATTAGTTTGAGGATATGAC CTAATAAATGCCTCTTTATACCTAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCACATTTGGACACACTTATAAATGAGCAAGCTTCTTATGTTTTAACTCGAGCAGGCTT GAGTTATATCTATAACACCGTGCAGCAGCATAAACCTGAACAGGGCCCGTTAGCTAATTT GCCCAACCTAGATTCTGTGGCAGTGAAAGCTGCGATGGTTCAGTTTGATCGCTATCTCTC AGCCCCAGACCACCTGTTAATGCCACAGCTGAACTTTCTTCTGAGTGCCACAGTGAAAGA GCAGATCATAAAACAGTCTACAGACCTAGTCTGCAGAGCCTATGGTGAAGTGTACACAGC TGTGATGAATCCGGTCAATGAGTACAAAGACCCCGAGAGCGTTCTGCACCGATCGCCACA GCAAGTGCAGACTCTTCTCTCCTGATTGTCGTCTTCGAACGTTTTAGCAAAATACTGCAT TCCTAAAACACTGAAGGTTTTCTTGGTTTTTAGTCTGTTAATCTTTGAAATTTGATGGTT ACAGTTTCTTTGTAGCATAAGAATGCAGGTCCCAATAATTGCTTTGCCTTAGTCACAGTA ATGTGGAGGTAACGTGCTGACCTGAGTTGGTGTTGCTCTCTGTTGGCTCTCCTCGTGAAC GTTTATTCTCAACTAGCCCTCTCTCCAGCTCAGCAGTGTCCCTTCGTTCTGGAATATGGT GTAATGGGAAAAGAGAAGTGTGAGAAGTTTGGGGGATTTTTTTTTTTTTAACAAGATAGT TCTTGTAAGAAACTGCATTAAAAATTTATTTAAAGCTAAGAATTAGTTTGAGGATATGAC CTAATAAATGCCTCTTTATACCTAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-104, gnl|bosTau2|chr12 (12220965-12221068) | |
| 1-104, gnl|canFam2|chr25 (4435072-4434893) | |
| 1-104, gnl|danRer3|chrNA (183202537-183202348) | |
| 1-104, gnl|dasNov1|scaffold_8811 (29175-28998) | |
| 1-104, gnl|echTel1|scaffold_285754 (7358-7533) | |
| 1-104, gnl|fr1|chrUn (54637438-54637300) | |
| 1-104, gnl|galGal2|chr1 (163010801-163010655) | |
| 1-104, gnl|hg17|chr13 (39195422-39195597) | |
| 1-104, gnl|Hg17|chr13 (39195475-39195578) | |
| 1-104, gnl|loxAfr1|scaffold_36628 (11238-11062) | |
| 1-104, gnl|mm7|chr3 (53116702-53116539) | |
| 1-104, gnl|Mm7|chr3 (53116650-53116547) | |
| 1-104, gnl|monDom2|scaffold_15 (52267775-52267945) | |
| 1-104, gnl|oryCun1|scaffold_200636 (19371-19196) | |
| 1-104, gnl|panTro1|chr14 (38570439-38570614) | |
| 1-104, gnl|rheMac2|chr17 (18795698-18795875) | |
| 1-104, gnl|rn3|chr2 (142726839-142726670) | |
| 1-104, gnl|tetNig1|chr16 (5925397-5925514) | |
| 1-104, gnl|xenTro1|scaffold_223 (650653-650811) | |
| 238-786, gnl|bosTau2|chr12 (12235920-12236472) | |
| 238-786, gnl|Hg17|chr13 (39223083-39223617) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-104, gnl|bosTau2|chr12 (12220965-12221068) | |
| 1-104, gnl|canFam2|chr25 (4435072-4434893) | |
| 1-104, gnl|danRer3|chrNA (183202537-183202348) | |
| 1-104, gnl|dasNov1|scaffold_8811 (29175-28998) | |
| 1-104, gnl|echTel1|scaffold_285754 (7358-7533) | |
| 1-104, gnl|fr1|chrUn (54637438-54637300) | |
| 1-104, gnl|galGal2|chr1 (163010801-163010655) | |
| 1-104, gnl|hg17|chr13 (39195422-39195597) | |
| 1-104, gnl|Hg17|chr13 (39195475-39195578) | |
| 1-104, gnl|loxAfr1|scaffold_36628 (11238-11062) | |
| 1-104, gnl|mm7|chr3 (53116702-53116539) | |
| 1-104, gnl|Mm7|chr3 (53116650-53116547) | |
| 1-104, gnl|monDom2|scaffold_15 (52267775-52267945) | |
| 1-104, gnl|oryCun1|scaffold_200636 (19371-19196) | |
| 1-104, gnl|panTro1|chr14 (38570439-38570614) | |
| 1-104, gnl|rheMac2|chr17 (18795698-18795875) | |
| 1-104, gnl|rn3|chr2 (142726839-142726670) | |
| 1-104, gnl|tetNig1|chr16 (5925397-5925514) | |
| 1-104, gnl|xenTro1|scaffold_223 (650653-650811) | |
| 238-786, gnl|bosTau2|chr12 (12235920-12236472) | |
| 238-786, gnl|Hg17|chr13 (39223083-39223617) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mga (0.32041) | |
| sug (0.254582) | |
| ssp (0.13552) |