Non-Coding RNA Search

Ss1.1-rmga19_p15.5

Sequence:


               
               AGAATGTACCTTGTCTTGGGTTGACCCAAACCAAAAGCTTTTTTTGGAACACAGGTGGGA
TCTTTAAAAAAAGGCAGCCAGTTTTCATTACAGTTGACCCTTGAACAACATGGGGATTAA
CTTGCATATATCCAAGGTTGCTCCATATCTGTGGATTCAACCAACCACTAGAATAGTACT
GTGGTGTTTACTATTGAAAATTATCTGTGGACCTGCACAGTTCTAACCCTCGTTTTCAAG
GGTCCACTGTATTTGGGTTTACAGTTTGAATTCTTTTGTGCCATGAGAGTTAAGAGTTTA
AATGAATCCTTTTACAAAGTTAATTTTTCTTTAAGTCTGTGCTGATTCGTGTGGATTTAC
TCTTGTATAAAGGTAATTTTCACTATACTCTAAAAGAACTACAGACTTAGAAAAACAACA
ACAACAAATCCAATCGAGATTTCCCTAAGGATCTTACTCATGAAAATGATTCTGGGTCAG
AGTGATGTACTCAGTTAAATTGGGTGAATGGCAAAGAACCAGCCATTTTATCTAGATACG
GCACCTGGCTTTAAAGAGCCTATTTTTCTAACCTCTAAGTACAGGCCCCAGTGAAAAACA
TACTGGGGAGATTCAACCTCTCTATGAGAAAAGGTCAAACACCTTTTCCAAATTTAATAT
TGCCTTAAATTCTGCCACACTGCCTTTGATATTCTTGAAAGTCCATGTAGTTCTCTAGAG
ATAGACTTCAAAAAGATGATATTTTATCAAAGACTAATCTGTGCACCTCTGATTCAGTGT
TTTATGTCTTTCACTTTCCCTGGAGTAAAGCTCTTTTCTATACTTCTGAGTCTATTATAT
TTAATTCTGTTCTTGGTAGTCAAAGAGCACAGGAAATAAATGTCATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAATGTACCTTGTCTTGGGTTGACCCAAACCAAAAGCTTTTTTTGGAACACAGGTGGGA
TCTTTAAAAAAAGGCAGCCAGTTTTCATTACAGTTGACCCTTGAACAACATGGGGATTAA
CTTGCATATATCCAAGGTTGCTCCATATCTGTGGATTCAACCAACCACTAGAATAGTACT
GTGGTGTTTACTATTGAAAATTATCTGTGGACCTGCACAGTTCTAACCCTCGTTTTCAAG
GGTCCACTGTATTTGGGTTTACAGTTTGAATTCTTTTGTGCCATGAGAGTTAAGAGTTTA
AATGAATCCTTTTACAAAGTTAATTTTTCTTTAAGTCTGTGCTGATTCGTGTGGATTTAC
TCTTGTATAAAGGTAATTTTCACTATACTCTAAAAGAACTACAGACTTAGAAAAACAACA
ACAACAAATCCAATCGAGATTTCCCTAAGGATCTTACTCATGAAAATGATTCTGGGTCAG
AGTGATGTACTCAGTTAAATTGGGTGAATGGCAAAGAACCAGCCATTTTATCTAGATACG
GCACCTGGCTTTAAAGAGCCTATTTTTCTAACCTCTAAGTACAGGCCCCAGTGAAAAACA
TACTGGGGAGATTCAACCTCTCTATGAGAAAAGGTCAAACACCTTTTCCAAATTTAATAT
TGCCTTAAATTCTGCCACACTGCCTTTGATATTCTTGAAAGTCCATGTAGTTCTCTAGAG
ATAGACTTCAAAAAGATGATATTTTATCAAAGACTAATCTGTGCACCTCTGATTCAGTGT
TTTATGTCTTTCACTTTCCCTGGAGTAAAGCTCTTTTCTATACTTCTGAGTCTATTATAT
TTAATTCTGTTCTTGGTAGTCAAAGAGCACAGGAAATAAATGTCATCT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               3-888, gnl|bosTau2|chr2 (73971689-73970839)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-888, gnl|bosTau2|chr2 (73971689-73970839)

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

Help | Less info


               
               tbr (0.308356)
               

               
               sme (0.305437)
               

               
               aor (0.195274)
               

               
               ton (0.1755)
               

               
               fbs (0.175346)
               

               
               mga (0.160205)
               

               
               bfe (0.149858)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.308356)
               

               
               sme (0.305437)
               

               
               aor (0.195274)
               

               
               ton (0.1755)
               

               
               fbs (0.175346)
               

               
               mga (0.160205)
               

               
               bfe (0.149858)

	tbr (0.308356)
	sme (0.305437)
	aor (0.195274)
	ton (0.1755)
	fbs (0.175346)
	mga (0.160205)
	bfe (0.149858)