Non-Coding RNA Search

Ss1.1-rmgm014_p19.5

Sequence:


               
               ATGAATAATATTGATGGAAGAGAACTGTTGAATCTTACAAAAGAAAGTCTGGCTGATGAT
TTGAAGATTGAATCTCTAGGGTTGCGGAGTAAAGTTCTGAGGAAAATTGAAGAGCTCAGG
AAAAAGGTGAAAATCCTTTCTTCGGGAATTCCTGATGAATTTATATGTCCAATAACTAGG
GAGCTTATGAAAGATCCTGTCATTGCATCAGATGGCTATTCATACGAAAAGGAAGCGATG
GAAAATTGGATCAGCAAAAAGAAACGTACGAGTCCCATGACAAATCTTGTTCTTCCTTCA
GTGGTACTGACGCCAAATAGGACTCTGAAAATGGCCATTGAGCGATGGCTAGAGACACAT
CAAAAATAAAACTTTATATTATAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGAATAATATTGATGGAAGAGAACTGTTGAATCTTACAAAAGAAAGTCTGGCTGATGAT
TTGAAGATTGAATCTCTAGGGTTGCGGAGTAAAGTTCTGAGGAAAATTGAAGAGCTCAGG
AAAAAGGTGAAAATCCTTTCTTCGGGAATTCCTGATGAATTTATATGTCCAATAACTAGG
GAGCTTATGAAAGATCCTGTCATTGCATCAGATGGCTATTCATACGAAAAGGAAGCGATG
GAAAATTGGATCAGCAAAAAGAAACGTACGAGTCCCATGACAAATCTTGTTCTTCCTTCA
GTGGTACTGACGCCAAATAGGACTCTGAAAATGGCCATTGAGCGATGGCTAGAGACACAT
CAAAAATAAAACTTTATATTATAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61809111|ref|XP_584692.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61809111|ref|XP_584692.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               205-379, gnl|bosTau2|chr12 (21038201-21038024)
               

               
               205-379, gnl|Hg17|chr2 (159918209-159918041)
               

               
               205-379, gnl|Mm7|chr2 (59783511-59783343)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               205-379, gnl|bosTau2|chr12 (21038201-21038024)
               

               
               205-379, gnl|Hg17|chr2 (159918209-159918041)
               

               
               205-379, gnl|Mm7|chr2 (59783511-59783343)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               mgm (0.180343)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               mgm (0.180343)

	205-379, gnl\|bosTau2\|chr12 (21038201-21038024)
	205-379, gnl\|Hg17\|chr2 (159918209-159918041)
	205-379, gnl\|Mm7\|chr2 (59783511-59783343)