Non-Coding RNA Search

Ss1.1-rmgm031_p11.5

Sequence:


               
               TTTTTTTTTTTTTTTGAAATATTTACAAACTGTATTTCAAACTATGAGATATTAGAATAT
GCTTTTAGAACAAAGGAAAAAGGCCAAAAAATGTGATTCATGTAAGTGTGCAAAGCTCTT
AGAGAAGGGTAATCTCTACTGTGGATAAGAACACAAATGTGCTCTCCATCAAGTGAAATA
ATTATTTTTCCCCACTATGTTTTTTGAAATGAAACATCTAATGCATTCATACTCAGAAAT
CATAGAAAACTCCTTATTAAAACCTTCACGTATAGATGATCTAAGCAAGGCTTTTCCTAT
AGCAAACCCAGCTCTCTCATATTTTCAGGATATGATCATCCTGCCATCAGTTGGGGTTAT
GGTTTAAATATTTTGAATTAGACATTACTACTGATTCCTTTTAGAAAAACAAGTAGATTT
TATAATTATACAATTCTGAACATTTAGCTTCTTTAAATTTCTATTCTACACAAAATATAT
GTCGAAGAAAAAAAAAAAACTTCCCAAAAAAAAAAAAAGGTACTTCAGAGAGTTAATTTC
AACTACCGGGTTTTAACAATGAGGTGTCAAACCTTTCTGGTTGGAAAAGTGCCCTTAGGA
AATTAATGGGACTTCTCAAGGTTGTTCCCCTTCCACCACCCTTTTATACTTTTCCTTCTT
TCCCCAAGGATTAGAAACTTTACATAGGGAGCAGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTGAAATATTTACAAACTGTATTTCAAACTATGAGATATTAGAATAT
GCTTTTAGAACAAAGGAAAAAGGCCAAAAAATGTGATTCATGTAAGTGTGCAAAGCTCTT
AGAGAAGGGTAATCTCTACTGTGGATAAGAACACAAATGTGCTCTCCATCAAGTGAAATA
ATTATTTTTCCCCACTATGTTTTTTGAAATGAAACATCTAATGCATTCATACTCAGAAAT
CATAGAAAACTCCTTATTAAAACCTTCACGTATAGATGATCTAAGCAAGGCTTTTCCTAT
AGCAAACCCAGCTCTCTCATATTTTCAGGATATGATCATCCTGCCATCAGTTGGGGTTAT
GGTTTAAATATTTTGAATTAGACATTACTACTGATTCCTTTTAGAAAAACAAGTAGATTT
TATAATTATACAATTCTGAACATTTAGCTTCTTTAAATTTCTATTCTACACAAAATATAT
GTCGAAGAAAAAAAAAAAACTTCCCAAAAAAAAAAAAAGGTACTTCAGAGAGTTAATTTC
AACTACCGGGTTTTAACAATGAGGTGTCAAACCTTTCTGGTTGGAAAAGTGCCCTTAGGA
AATTAATGGGACTTCTCAAGGTTGTTCCCCTTCCACCACCCTTTTATACTTTTCCTTCTT
TCCCCAAGGATTAGAAACTTTACATAGGGAGCAGGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               13-517, gnl|bosTau2|chr5 (1959154-1959663)
               

               
               13-517, gnl|Hg17|chr12 (74709096-74709611)
               

               
               13-517, gnl|Mm7|chr10 (110971124-110970620)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-517, gnl|bosTau2|chr5 (1959154-1959663)
               

               
               13-517, gnl|Hg17|chr12 (74709096-74709611)
               

               
               13-517, gnl|Mm7|chr10 (110971124-110970620)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               mgm (0.180343)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgm (0.180343)

	13-517, gnl\|bosTau2\|chr5 (1959154-1959663)
	13-517, gnl\|Hg17\|chr12 (74709096-74709611)
	13-517, gnl\|Mm7\|chr10 (110971124-110970620)