Non-Coding RNA Search

Ss1.1-rmgm035_j2.5

Sequence:


               
               CCGCACTGACCCGTCCCGCGTGCACCCCATGCATTTGTCAGCACTAAGACGCCAACACTG
GTACATCACTATTAACTCCAGACTTTATGCAGACTTCAGTAGTTTTCCACTAATGTCTTT
TTGTCTCATGATCTAATCCAGGGTGCCACATCGTACTAAGTGTTTTGTGATAGTTTTTTA
ATGGATGTTTTGTAATTTCACATTTCTTGATTCAGTGTCCTGTTTGTGCTTCTGTATAAT
CATTTAGTTTTCAATTGCGAATCATTTTTGAGTGCCAAAAGTGCCATATTTTTCACACTC
CAAACTCCTCAGCAGGCCTCTGAAGACAACTTGGCTTTATTTATGACACTATATTTTAAA
GTAACTGAAAATATTCAAAATAATGCTTACTTTGTTCAGAGTCCATGAACTCCAACCGGA
ACATATAAACGTCAAATTTGAGCAATAAATTTTGATTGATTTTTGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCACTGACCCGTCCCGCGTGCACCCCATGCATTTGTCAGCACTAAGACGCCAACACTG
GTACATCACTATTAACTCCAGACTTTATGCAGACTTCAGTAGTTTTCCACTAATGTCTTT
TTGTCTCATGATCTAATCCAGGGTGCCACATCGTACTAAGTGTTTTGTGATAGTTTTTTA
ATGGATGTTTTGTAATTTCACATTTCTTGATTCAGTGTCCTGTTTGTGCTTCTGTATAAT
CATTTAGTTTTCAATTGCGAATCATTTTTGAGTGCCAAAAGTGCCATATTTTTCACACTC
CAAACTCCTCAGCAGGCCTCTGAAGACAACTTGGCTTTATTTATGACACTATATTTTAAA
GTAACTGAAAATATTCAAAATAATGCTTACTTTGTTCAGAGTCCATGAACTCCAACCGGA
ACATATAAACGTCAAATTTGAGCAATAAATTTTGATTGATTTTTGAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-464, gnl|bosTau2|chr5 (9290893-9291346)
               

               
               23-464, gnl|Hg17|chr12 (81408706-81409169)
               

               
               23-464, gnl|Mm7|chr10 (105195878-105195421)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-464, gnl|bosTau2|chr5 (9290893-9291346)
               

               
               23-464, gnl|Hg17|chr12 (81408706-81409169)
               

               
               23-464, gnl|Mm7|chr10 (105195878-105195421)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               mgm (0.360685)
               

               
               tbr (0.154178)
               

               
               lnt (0.142308)
               

               
               kid (0.129735)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgm (0.360685)
               

               
               tbr (0.154178)
               

               
               lnt (0.142308)
               

               
               kid (0.129735)

	23-464, gnl\|bosTau2\|chr5 (9290893-9291346)
	23-464, gnl\|Hg17\|chr12 (81408706-81409169)
	23-464, gnl\|Mm7\|chr10 (105195878-105195421)