Ss1.1-rmgm32_e10.5
|
CAATTCGTCACCAGGAGGAAGACGCAGCTGGTTGCCCAGCCCAAAGGCCCATTAGGGGAT
GCAGTTATGGGCTCTGTCGCCGTGGATTGTTATTTTGTGTCAGTAAGTAATCCATAAAGT
GCCAACATGGGAAAGAAACGGACAAAGGGAAAAACTGTTCCAATTGATGATTCTTCTGAA
TCTTTAGAACCCACATGCAGACACATTAGAAAAGGACTGGAACAAGGTAATTTGAAAAAG
GCTTTGGTGAATGTGGAATGGAACATTTGCCAAGATTGTAAGACGGACAATAAAGTAAAA
GATAAATCTGAAGAAGAAACAGAAAATCCTTCGGTTTGGCTTTGTCTTAAATGTGGCCAT
CAGGGCTGTGGCAGAGATTCTCAGGAGCAGCATGCCTTGAAGCACTACATGACGCCAAGA
TCTGAACCTCATTGCCTGGTTCTTAGTTTGGACAACTGGAGTGTATGGTGTTACCTATGT
GATGATGAGGTCCAGTATTGTAATTCAAACCGATTGGGTCAGGTGGTTGACTATGTTAGA
AAACAAGCTGGTATTACAGCTCCAAAATCAGCCAAAGATAATGGTAATATTGAACTTGAA
AATAAAAAACTGCTGGAAAAAGAAAAAATGAGCAAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAATTCGTCACCAGGAGGAAGACGCAGCTGGTTGCCCAGCCCAAAGGCCCATTAGGGGAT
GCAGTTATGGGCTCTGTCGCCGTGGATTGTTATTTTGTGTCAGTAAGTAATCCATAAAGT
GCCAACATGGGAAAGAAACGGACAAAGGGAAAAACTGTTCCAATTGATGATTCTTCTGAA
TCTTTAGAACCCACATGCAGACACATTAGAAAAGGACTGGAACAAGGTAATTTGAAAAAG
GCTTTGGTGAATGTGGAATGGAACATTTGCCAAGATTGTAAGACGGACAATAAAGTAAAA
GATAAATCTGAAGAAGAAACAGAAAATCCTTCGGTTTGGCTTTGTCTTAAATGTGGCCAT
CAGGGCTGTGGCAGAGATTCTCAGGAGCAGCATGCCTTGAAGCACTACATGACGCCAAGA
TCTGAACCTCATTGCCTGGTTCTTAGTTTGGACAACTGGAGTGTATGGTGTTACCTATGT
GATGATGAGGTCCAGTATTGTAATTCAAACCGATTGGGTCAGGTGGTTGACTATGTTAGA
AAACAAGCTGGTATTACAGCTCCAAAATCAGCCAAAGATAATGGTAATATTGAACTTGAA
AATAAAAAACTGCTGGAAAAAGAAAAAATGAGCAAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
185-364, gnl|bosTau2|chr1 (6521079-6520897) |
|
185-364, gnl|canFam2|chr31 (27057286-27057505) |
|
185-364, gnl|danRer3|chr15 (45570250-45570470) |
|
185-364, gnl|dasNov1|scaffold_14904 (8646-8864) |
|
185-364, gnl|echTel1|scaffold_322456 (98590-98370) |
|
185-364, gnl|fr1|chrUn (182259625-182259408) |
|
185-364, gnl|galGal2|chr1 (97745345-97745556) |
|
185-364, gnl|hg17|chr21 (29324773-29324994) |
|
185-364, gnl|Hg17|chr21 (29324784-29324966) |
|
185-364, gnl|loxAfr1|scaffold_25976 (3950-3730) |
|
185-364, gnl|mm7|chr16 (87503897-87504113) |
|
185-364, gnl|Mm7|chr16 (87503910-87504089) |
|
185-364, gnl|monDom2|scaffold_29 (5906537-5906322) |
|
185-364, gnl|oryCun1|scaffold_186795 (19144-18929) |
|
185-364, gnl|panTro1|chr22 (29341966-29342187) |
|
185-364, gnl|rheMac2|chr3 (17631432-17631212) |
|
185-364, gnl|rn3|chr11 (27211932-27212147) |
|
185-364, gnl|tetNig1|chr16 (6095034-6095231) |
|
185-364, gnl|xenTro1|scaffold_490 (462928-463151) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
185-364, gnl|bosTau2|chr1 (6521079-6520897) |
|
185-364, gnl|canFam2|chr31 (27057286-27057505) |
|
185-364, gnl|danRer3|chr15 (45570250-45570470) |
|
185-364, gnl|dasNov1|scaffold_14904 (8646-8864) |
|
185-364, gnl|echTel1|scaffold_322456 (98590-98370) |
|
185-364, gnl|fr1|chrUn (182259625-182259408) |
|
185-364, gnl|galGal2|chr1 (97745345-97745556) |
|
185-364, gnl|hg17|chr21 (29324773-29324994) |
|
185-364, gnl|Hg17|chr21 (29324784-29324966) |
|
185-364, gnl|loxAfr1|scaffold_25976 (3950-3730) |
|
185-364, gnl|mm7|chr16 (87503897-87504113) |
|
185-364, gnl|Mm7|chr16 (87503910-87504089) |
|
185-364, gnl|monDom2|scaffold_29 (5906537-5906322) |
|
185-364, gnl|oryCun1|scaffold_186795 (19144-18929) |
|
185-364, gnl|panTro1|chr22 (29341966-29342187) |
|
185-364, gnl|rheMac2|chr3 (17631432-17631212) |
|
185-364, gnl|rn3|chr11 (27211932-27212147) |
|
185-364, gnl|tetNig1|chr16 (6095034-6095231) |
|
185-364, gnl|xenTro1|scaffold_490 (462928-463151) |
|
mgm (0.180343) |
|
rec (0.17307) |
|
pla (0.133672) |
|
ldo (0.0970026) |
|
mgm (0.180343) |
|
rec (0.17307) |
|
pla (0.133672) |
|
ldo (0.0970026) |
