Non-Coding RNA Search

Ss1.1-rmgp001_g10.5

Sequence:


               
               AAGAATGAAATCATGCCATTTGCCGCAACATGGATGGAACTACAGATTCTCACAGTGAAG
TAAGTCAAAAAGAGAAAGACAAATACTATATGATATCACTTAAATCTGGAATCTAATATA
CAGCACAAAGGAACCTTTCCACAGAAAAGAAAATCATGGACTTGGAGAATAGTCTTGTGG
TTGCCAAGGGGGAGGGGGAGGGAGTGGGGTGCTTGGGGAGCTTGGGCTTAATAGATACAA
ACTATTGCCTTTGGAATGGATTAGCAATGAGATCCTGCTGTGTAGCACTGGGAACTATGT
CTAGTCACTAATAGAGCATGATAATGTTCAAAAATAGAATGTGTACATGTATGTGTAACT
GGGTCACCATGCTGTAGAGCAGAAAAAAAAAAAATTGTATTGGGGAAATAACTATTAAAA
AATTAATAACAAATATTCTTTGTTTAAAAAAAAAATTTAGATGGCCAAAGATTTTTTAAA
TGTGTGTATATAAGACAGTAAACATTGATTATACACCTGTAGTGTATAAAACAGCATGAC
AGGCAATGTTACACTTTCTGAAAATACTGAGTACCAATTGTAAGTGAAAGATTAAACTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAATGAAATCATGCCATTTGCCGCAACATGGATGGAACTACAGATTCTCACAGTGAAG
TAAGTCAAAAAGAGAAAGACAAATACTATATGATATCACTTAAATCTGGAATCTAATATA
CAGCACAAAGGAACCTTTCCACAGAAAAGAAAATCATGGACTTGGAGAATAGTCTTGTGG
TTGCCAAGGGGGAGGGGGAGGGAGTGGGGTGCTTGGGGAGCTTGGGCTTAATAGATACAA
ACTATTGCCTTTGGAATGGATTAGCAATGAGATCCTGCTGTGTAGCACTGGGAACTATGT
CTAGTCACTAATAGAGCATGATAATGTTCAAAAATAGAATGTGTACATGTATGTGTAACT
GGGTCACCATGCTGTAGAGCAGAAAAAAAAAAAATTGTATTGGGGAAATAACTATTAAAA
AATTAATAACAAATATTCTTTGTTTAAAAAAAAAATTTAGATGGCCAAAGATTTTTTAAA
TGTGTGTATATAAGACAGTAAACATTGATTATACACCTGTAGTGTATAAAACAGCATGAC
AGGCAATGTTACACTTTCTGAAAATACTGAGTACCAATTGTAAGTGAAAGATTAAACTAT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-298, gnl|bosTau2|chr1 (20204801-20205101)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-298, gnl|bosTau2|chr1 (20204801-20205101)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mgp (0.230681)
               

               
               ill (0.175593)
               

               
               che (0.136314)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               ill (0.175593)
               

               
               che (0.136314)