Non-Coding RNA Search

Ss1.1-rmgp012_b22.5

Sequence:


               
               AAATTGGGTTGAAACAGGCACAGAAGTTTACAGACAGTTTTGGATCTTTGATGTGCAGAA
TCCAGAGGAAGTAGCAGTTAATAGCAGCAAAATTAAAGTTAAGCAAAGAGGTCCTTATAC
ATACAGAGTTCGTTATCTAGCCAAGAAAAATATAGTCCAGGACCCTAAGACCCACACAGT
CTCTTTCCTACAGCCCAAAGGTGCCATCTTTGAACCTTCACTGTCAGTTGGAACAGAAAA
TGATACTTTCACTGTTCTCAATCTGGCTGTAGCAGTGAGTATACAAACAGCAAAATCATT
TGTTTTGATATACTCTAGAATCCATTGTAAGTAATCTCATGATTATAATATCAATAGATA
TCCTTTGTCATTTTTGAAAAATGTGTTCTTCTCTCATTATTATGATTTATGGTCATTTGA
AAAGATGACAAAATCATACAACAATCAACTGAATTAGAACATCACTTAAAGTGTATTATT
AAAATGTCGGATTTAACTTAAATTCTTCTTCATATGGCTCACACTGAGGCAGAGAAATGT
ATTTATTCAGAGATGAAAAAACATTGCACCCTTACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATTGGGTTGAAACAGGCACAGAAGTTTACAGACAGTTTTGGATCTTTGATGTGCAGAA
TCCAGAGGAAGTAGCAGTTAATAGCAGCAAAATTAAAGTTAAGCAAAGAGGTCCTTATAC
ATACAGAGTTCGTTATCTAGCCAAGAAAAATATAGTCCAGGACCCTAAGACCCACACAGT
CTCTTTCCTACAGCCCAAAGGTGCCATCTTTGAACCTTCACTGTCAGTTGGAACAGAAAA
TGATACTTTCACTGTTCTCAATCTGGCTGTAGCAGTGAGTATACAAACAGCAAAATCATT
TGTTTTGATATACTCTAGAATCCATTGTAAGTAATCTCATGATTATAATATCAATAGATA
TCCTTTGTCATTTTTGAAAAATGTGTTCTTCTCTCATTATTATGATTTATGGTCATTTGA
AAAGATGACAAAATCATACAACAATCAACTGAATTAGAACATCACTTAAAGTGTATTATT
AAAATGTCGGATTTAACTTAAATTCTTCTTCATATGGCTCACACTGAGGCAGAGAAATGT
ATTTATTCAGAGATGAAAAAACATTGCACCCTTACT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12620246|gb|AAG60625.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12620246|gb|AAG60625.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               124-533, gnl|bosTau2|chr4 (14763550-14763949)
               

               
               124-533, gnl|Hg17|chr7 (79935027-79936779)
               

               
               124-533, gnl|Mm7|chr5 (16828342-16827978)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               124-533, gnl|bosTau2|chr4 (14763550-14763949)
               

               
               124-533, gnl|Hg17|chr7 (79935027-79936779)
               

               
               124-533, gnl|Mm7|chr5 (16828342-16827978)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mgp (0.230681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)

	124-533, gnl\|bosTau2\|chr4 (14763550-14763949)
	124-533, gnl\|Hg17\|chr7 (79935027-79936779)
	124-533, gnl\|Mm7\|chr5 (16828342-16827978)