Non-Coding RNA Search

Ss1.1-rmgp017_e8.5

Sequence:


               
               GTTCTTATTGTTCTAACGTAAGACCTGTTCTCTCTAGCCACTGATTTTACCAGGCTTTCT
AAAAGATCTCGTGGTAAATACACACATGGTACTGAAAACAACCCCTCTACCCAGTGTAAT
AATTTACTGAAGTATTCAACTCTTCATTACCTTTATGATAGCAAACCTGATGCTTTTTTT
TTAAGAACTTGTTACTCTGACTTCTGTATATGTTGCACTGAAAAGGTTAATATTTAATGT
TTAATTTATTTTGTGTGGTAAGTTAATTTTGATTTCTGTAATGCCTTAATGTGATTAGCC
ATTCTTTTCCTTAATATCTGAATTATAGTTATTTAAAGAGTAGTGAGCGATATAAAATGC
AGTTGTGTTTTTCAGTAATATGTATTGTTGTTCAGTTGTACTGTACCTTGTTTGAAAGGA
TGAAGGAATGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCTTATTGTTCTAACGTAAGACCTGTTCTCTCTAGCCACTGATTTTACCAGGCTTTCT
AAAAGATCTCGTGGTAAATACACACATGGTACTGAAAACAACCCCTCTACCCAGTGTAAT
AATTTACTGAAGTATTCAACTCTTCATTACCTTTATGATAGCAAACCTGATGCTTTTTTT
TTAAGAACTTGTTACTCTGACTTCTGTATATGTTGCACTGAAAAGGTTAATATTTAATGT
TTAATTTATTTTGTGTGGTAAGTTAATTTTGATTTCTGTAATGCCTTAATGTGATTAGCC
ATTCTTTTCCTTAATATCTGAATTATAGTTATTTAAAGAGTAGTGAGCGATATAAAATGC
AGTTGTGTTTTTCAGTAATATGTATTGTTGTTCAGTTGTACTGTACCTTGTTTGAAAGGA
TGAAGGAATGAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-432, gnl|bosTau2|chr14 (18331689-18331263)
               

               
               1-432, gnl|Hg17|chr2 (70586519-70586086)
               

               
               1-432, gnl|Mm7|chr6 (86350378-86350785)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-432, gnl|bosTau2|chr14 (18331689-18331263)
               

               
               1-432, gnl|Hg17|chr2 (70586519-70586086)
               

               
               1-432, gnl|Mm7|chr6 (86350378-86350785)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mgp (0.461361)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.461361)
               

               
               bla (0.124347)

	1-432, gnl\|bosTau2\|chr14 (18331689-18331263)
	1-432, gnl\|Hg17\|chr2 (70586519-70586086)
	1-432, gnl\|Mm7\|chr6 (86350378-86350785)