Non-Coding RNA Search

Ss1.1-rmgp027_d9.5

Sequence:


               
               CAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTCTCGCTTG
AAAGATAGATCATGGTGGCATAACAACTATTTCCAAAAGGCTGAAAATACTGTGTAAAAT
CATACTTATCTGTTGGTTTCTGATTATATAGTTTGGTATTGCATTTTTCTTTTGAATGGT
GATTTTTTTTTCACTAGATGATTGTTTTAATTTTTATAGCATTAAAAGAGACCATGTAGA
GTCCATATCAAGTTTAGAATTACAATTTTCAAGATGAGTCATAATCAAGACATATGTATG
TTTATATTGATAAGCAATTAAGGCACAGCCATATTGATAATAAAGAACAGTGAAACAAAT
CAAGTAGCAAGTAATAGCTTTTCCTTGTAGTGGTTTTTCCCCTTGAGTTACTAACTTGAT
ATGAGATTGTGTCTTTTTTATGCATTACAAATCCTTCTTCTGCTTACAGCTATGCAGTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTCTCGCTTG
AAAGATAGATCATGGTGGCATAACAACTATTTCCAAAAGGCTGAAAATACTGTGTAAAAT
CATACTTATCTGTTGGTTTCTGATTATATAGTTTGGTATTGCATTTTTCTTTTGAATGGT
GATTTTTTTTTCACTAGATGATTGTTTTAATTTTTATAGCATTAAAAGAGACCATGTAGA
GTCCATATCAAGTTTAGAATTACAATTTTCAAGATGAGTCATAATCAAGACATATGTATG
TTTATATTGATAAGCAATTAAGGCACAGCCATATTGATAATAAAGAACAGTGAAACAAAT
CAAGTAGCAAGTAATAGCTTTTCCTTGTAGTGGTTTTTCCCCTTGAGTTACTAACTTGAT
ATGAGATTGTGTCTTTTTTATGCATTACAAATCCTTCTTCTGCTTACAGCTATGCAGTAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q19497_CAEEL

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q19497_CAEEL

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-110, gnl|bosTau2|chr1 (95682253-95682144)
               


               
               132-540, gnl|bosTau2|chr2 (10714023-10714432)
               

               
               132-540, gnl|Hg17|chr2 (159942823-159942395)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-110, gnl|bosTau2|chr1 (95682253-95682144)
               


               
               132-540, gnl|bosTau2|chr2 (10714023-10714432)
               

               
               132-540, gnl|Hg17|chr2 (159942823-159942395)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mgp (0.230681)
               

               
               gul (0.177588)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               gul (0.177588)

	1-110, gnl\|bosTau2\|chr1 (95682253-95682144)

	132-540, gnl\|bosTau2\|chr2 (10714023-10714432)
	132-540, gnl\|Hg17\|chr2 (159942823-159942395)