Non-Coding RNA Search

Ss1.1-rmgp027_i23.5

Sequence:


               
               GTGACAATGCCAGATCCTTAACCCACTGAGCTGCTGCAGTGACAATGCCAGATCCTTAAC
CCACTGCGCCAAAAGGGAACTCCTATAATAAAAATGTTTTATCCAAATCAGCACATCCTC
ATTAATTTGGAAAAATTAAAGACAGTAGACATTTGAATACGGTAATCAGCTGACCCCAAA
TAGATAAGTATCTCTCTATTTTCATAAATTTGTAGTAATAAGTTTATAGATACTCACATT
AGGATTTTCTGTTTTGTTTTTAATAGTTGGTATTTGGCAGTCCACCACAAAGCCTTGGTA
TTAATTTTACATATCATAGATTTAGAAGTGATAGAAAAATATAACTTCATATTTCTCACC
CTTTAGAATTTTACAACAAAAAACTTCATTTCTAAATTAAATGTTCTTTTGTGGCTAGGC
TTTAGAAGTTTTTAGTTTGAAGTGGAATTTCGATTTTTTGATATTTGTTATGTAAACCTT
AATGAGAAGCATATCTAATTGTATTGATATATCAATATTAAAATTGAATGGCATTGATTA
AAGTTAGCTACTGATGACTTTTCAAATGACATGGATGTAGAGATAAAGTTTGATTCTAAT
GTTTTATTATACTCTTACTATAATATGTTTTATAACTCTCATTTACCAAACTAATCTTCT
TAGTCAATTTCAGAAGAGACAGACTTTTTAATCAGGAAAGAAAAAAAGTAGGTTTAAAAT
TAAACTTTGGCTTTTGGTCAAGATTTGACTTAAAGTATACTTATAAACTCCCAGTAAGCA
CATAAATCTTTGCTTTTGATAAAAAGTAATAAAGTTTAATTCAGATCAAGACCAAGTCTT
TAACCAAAACAAAAACTTTAGTTATTATACTCCCACATCTCTAATTTAAAATGAACTAAA
ATTAATATACTTCCATATACTATTTCCTAACGGAACAACTCTGGGTTTATGATACAGCCA
GATGTCTTCCTAAGTTTTATTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGACAATGCCAGATCCTTAACCCACTGAGCTGCTGCAGTGACAATGCCAGATCCTTAAC
CCACTGCGCCAAAAGGGAACTCCTATAATAAAAATGTTTTATCCAAATCAGCACATCCTC
ATTAATTTGGAAAAATTAAAGACAGTAGACATTTGAATACGGTAATCAGCTGACCCCAAA
TAGATAAGTATCTCTCTATTTTCATAAATTTGTAGTAATAAGTTTATAGATACTCACATT
AGGATTTTCTGTTTTGTTTTTAATAGTTGGTATTTGGCAGTCCACCACAAAGCCTTGGTA
TTAATTTTACATATCATAGATTTAGAAGTGATAGAAAAATATAACTTCATATTTCTCACC
CTTTAGAATTTTACAACAAAAAACTTCATTTCTAAATTAAATGTTCTTTTGTGGCTAGGC
TTTAGAAGTTTTTAGTTTGAAGTGGAATTTCGATTTTTTGATATTTGTTATGTAAACCTT
AATGAGAAGCATATCTAATTGTATTGATATATCAATATTAAAATTGAATGGCATTGATTA
AAGTTAGCTACTGATGACTTTTCAAATGACATGGATGTAGAGATAAAGTTTGATTCTAAT
GTTTTATTATACTCTTACTATAATATGTTTTATAACTCTCATTTACCAAACTAATCTTCT
TAGTCAATTTCAGAAGAGACAGACTTTTTAATCAGGAAAGAAAAAAAGTAGGTTTAAAAT
TAAACTTTGGCTTTTGGTCAAGATTTGACTTAAAGTATACTTATAAACTCCCAGTAAGCA
CATAAATCTTTGCTTTTGATAAAAAGTAATAAAGTTTAATTCAGATCAAGACCAAGTCTT
TAACCAAAACAAAAACTTTAGTTATTATACTCCCACATCTCTAATTTAAAATGAACTAAA
ATTAATATACTTCCATATACTATTTCCTAACGGAACAACTCTGGGTTTATGATACAGCCA
GATGTCTTCCTAAGTTTTATTTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               165-967, gnl|bosTau2|chr17 (18574993-18575803)
               

               
               165-967, gnl|Hg17|chr4 (129115474-129116931)
               

               
               165-967, gnl|Mm7|chr3 (40559084-40559825)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               165-967, gnl|bosTau2|chr17 (18574993-18575803)
               

               
               165-967, gnl|Hg17|chr4 (129115474-129116931)
               

               
               165-967, gnl|Mm7|chr3 (40559084-40559825)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               mgp (0.230681)
               

               
               fcc (0.197785)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               fcc (0.197785)
               

               
               pgl (0.118483)

	165-967, gnl\|bosTau2\|chr17 (18574993-18575803)
	165-967, gnl\|Hg17\|chr4 (129115474-129116931)
	165-967, gnl\|Mm7\|chr3 (40559084-40559825)