Non-Coding RNA Search

Ss1.1-rmgp31_a12.5

Sequence:


               
               TGTGTCAGTTTTTCTCTCTGAAAACACTCCTTCCCCAAATAATCATTGTAGGAAAATAAG
CTAAAATCACTATCAGATAATAAATATTTAACTCCTATTTGACCAACTTGAGCCCAGTAC
TCATTTGAGTATAACTGTTCTAAATTGGTTTTCCAGATCAGTGTAATAAAGGGGTGAGGT
ACAACTTTTAAAAAGGTAAATTTGTGTCATTATAGGGAATGTCTAGAGAATCAAAACATT
GGATTATATGTTAAATTTTTGAGACAAAGTTTTGGGCATCTGTGATATTTTAGAGCATGA
TAAACTTGCTCATTTTAACTGATTCTCAACTTTTGTCTGCAGAGATGTAAAACAAATGCT
CTTGAAGCTTGTTGAACTCCGATCAAGTAACTGGGGTAGAGTTCATGCAACCTCAACATA
CAGGGAAGCGACACCTGAAAATGACCCTAATTATTTTATGAATGAACCAACATTCTATAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGTCAGTTTTTCTCTCTGAAAACACTCCTTCCCCAAATAATCATTGTAGGAAAATAAG
CTAAAATCACTATCAGATAATAAATATTTAACTCCTATTTGACCAACTTGAGCCCAGTAC
TCATTTGAGTATAACTGTTCTAAATTGGTTTTCCAGATCAGTGTAATAAAGGGGTGAGGT
ACAACTTTTAAAAAGGTAAATTTGTGTCATTATAGGGAATGTCTAGAGAATCAAAACATT
GGATTATATGTTAAATTTTTGAGACAAAGTTTTGGGCATCTGTGATATTTTAGAGCATGA
TAAACTTGCTCATTTTAACTGATTCTCAACTTTTGTCTGCAGAGATGTAAAACAAATGCT
CTTGAAGCTTGTTGAACTCCGATCAAGTAACTGGGGTAGAGTTCATGCAACCTCAACATA
CAGGGAAGCGACACCTGAAAATGACCCTAATTATTTTATGAATGAACCAACATTCTATAC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               1-105, gnl|bosTau2|chr25 (31351757-31351857)
               

               
               1-105, gnl|Hg17|chr7 (75602379-75602279)
               

               
               1-105, gnl|Mm7|chr5 (134881106-134881011)
               


               
               106-460, gnl|bosTau2|chr20 (16886069-16886415)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-105, gnl|bosTau2|chr25 (31351757-31351857)
               

               
               1-105, gnl|Hg17|chr7 (75602379-75602279)
               

               
               1-105, gnl|Mm7|chr5 (134881106-134881011)
               


               
               106-460, gnl|bosTau2|chr20 (16886069-16886415)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               mgp (0.230681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)

	1-105, gnl\|bosTau2\|chr25 (31351757-31351857)
	1-105, gnl\|Hg17\|chr7 (75602379-75602279)
	1-105, gnl\|Mm7\|chr5 (134881106-134881011)

	106-460, gnl\|bosTau2\|chr20 (16886069-16886415)