Non-Coding RNA Search

Ss1.1-rmgp31_j22.5.5

Sequence:


               
               GAAAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGGTCGGTTCTATATCA
GGTGGTAACCAGGGAGTACACGATCAACATTCACAAGCGCATCCATGGCGTGGGTTTTAA
GAAGCGTGCCCCTCGGGCACTCAAAGAAATCCGTAAATTTGCCATGAAGGAGATGGGAAC
TCCGGATGAAAGCATCGACACCAGGCTCAACAAAGCCGTCTGGGCCAAAGGAATAAGGAA
TGTCCCATACCGAATCCGTGTGCGGTTGTCCAGAAAACGTAATGAAGATGAAGACTCGCC
AAACAAGCTCTATACATTGGTCACCTATGTACCTGTCACCACTTTCAAAAATCTACAGAC
AGTTAACGTGGATGAGAACTAACTGCTGATTGTCAAATAAAAGTTGGTTATAGAGGCCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGGTCGGTTCTATATCA
GGTGGTAACCAGGGAGTACACGATCAACATTCACAAGCGCATCCATGGCGTGGGTTTTAA
GAAGCGTGCCCCTCGGGCACTCAAAGAAATCCGTAAATTTGCCATGAAGGAGATGGGAAC
TCCGGATGAAAGCATCGACACCAGGCTCAACAAAGCCGTCTGGGCCAAAGGAATAAGGAA
TGTCCCATACCGAATCCGTGTGCGGTTGTCCAGAAAACGTAATGAAGATGAAGACTCGCC
AAACAAGCTCTATACATTGGTCACCTATGTACCTGTCACCACTTTCAAAAATCTACAGAC
AGTTAACGTGGATGAGAACTAACTGCTGATTGTCAAATAAAAGTTGGTTATAGAGGCCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5M9K9_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5M9K9_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-402, gnl|bosTau2|chr11 (39497666-39498055)
               

               
               4-402, gnl|Hg17|chr7 (121468535-121468941)
               

               
               4-402, gnl|Mm7|chr1 (129684854-129684456)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-402, gnl|bosTau2|chr11 (39497666-39498055)
               

               
               4-402, gnl|Hg17|chr7 (121468535-121468941)
               

               
               4-402, gnl|Mm7|chr1 (129684854-129684456)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mgp (0.230681)
               

               
               fbs (0.175346)
               

               
               mcp (0.170648)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               fbs (0.175346)
               

               
               mcp (0.170648)

	4-402, gnl\|bosTau2\|chr11 (39497666-39498055)
	4-402, gnl\|Hg17\|chr7 (121468535-121468941)
	4-402, gnl\|Mm7\|chr1 (129684854-129684456)