Non-Coding RNA Search

Ss1.1-rnbm02b_a9.5

Sequence:


               
               CCACCTCTTCCTGCTGCTTCTGTATCCTTTAGGAACCTAGGAAAGTCTGGTCTTCGGGTG
TCCTGTCTTGGCCACCTCCCTTCTCTCCGTCCTCGGCCTTCCTGGATCCTGAAGCGGAGG
GAGCAGAGGAAAACGTTTCCAAAAGAGAAGGCAGGAGCACGCCATTTACTGGATTAGCAA
CCAACCGGAACAACTAATGAGTACTCACATCCACTCCCGGCATCTCCCACTCCTTCTGGA
AGACTCTCCAGTCGTGCCGCCACTTGGGTCGCCTCGCCCGTTCTGCCATCGGCCGCATTC
CGGTCCTCGCACCTCCGCCGCCCCCACGCGTGCCGCCGCGGGGAGTGGCCCGACCTTCGC
GTGACGCCTCGACGGGCGGGCTCTCAATATTAAAAGGGGGAAGAGGCCGCGGCGCGGGCC
CCAGGACGGGCCCGCTCGTTCTGTCCTAGGAGCCAGCCGCGTTGGCGACGCCCTCGAGTT
CGCGGCGGTCACAATGCAGCTCCTGGTGAGGGTGCCGTCTCTTCCGGAGCGGGGCGAACT
GGACTGCAACATCTGCTACCGGCCTTTCAACCTCGGGGTCCGCGCGCCCCGCCGCCTGCC
CGGCACGGCGCGGGCCTGCTGCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACCTCTTCCTGCTGCTTCTGTATCCTTTAGGAACCTAGGAAAGTCTGGTCTTCGGGTG
TCCTGTCTTGGCCACCTCCCTTCTCTCCGTCCTCGGCCTTCCTGGATCCTGAAGCGGAGG
GAGCAGAGGAAAACGTTTCCAAAAGAGAAGGCAGGAGCACGCCATTTACTGGATTAGCAA
CCAACCGGAACAACTAATGAGTACTCACATCCACTCCCGGCATCTCCCACTCCTTCTGGA
AGACTCTCCAGTCGTGCCGCCACTTGGGTCGCCTCGCCCGTTCTGCCATCGGCCGCATTC
CGGTCCTCGCACCTCCGCCGCCCCCACGCGTGCCGCCGCGGGGAGTGGCCCGACCTTCGC
GTGACGCCTCGACGGGCGGGCTCTCAATATTAAAAGGGGGAAGAGGCCGCGGCGCGGGCC
CCAGGACGGGCCCGCTCGTTCTGTCCTAGGAGCCAGCCGCGTTGGCGACGCCCTCGAGTT
CGCGGCGGTCACAATGCAGCTCCTGGTGAGGGTGCCGTCTCTTCCGGAGCGGGGCGAACT
GGACTGCAACATCTGCTACCGGCCTTTCAACCTCGGGGTCCGCGCGCCCCGCCGCCTGCC
CGGCACGGCGCGGGCCTGCTGCGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               245-623, gnl|bosTau2|chr19 (15294870-15295255)
               

               
               245-623, gnl|Hg17|chr17 (7760514-7760109)
               

               
               245-623, gnl|Mm7|chr11 (69421848-69422245)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               245-623, gnl|bosTau2|chr19 (15294870-15295255)
               

               
               245-623, gnl|Hg17|chr17 (7760514-7760109)
               

               
               245-623, gnl|Mm7|chr11 (69421848-69422245)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eye (0.170503)
               

               
               nbm (0.0993246)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               nbm (0.0993246)

	245-623, gnl\|bosTau2\|chr19 (15294870-15295255)
	245-623, gnl\|Hg17\|chr17 (7760514-7760109)
	245-623, gnl\|Mm7\|chr11 (69421848-69422245)