Non-Coding RNA Search

Ss1.1-rnbm22b_c18.5

Sequence:


               
               GAGATTGGCAGGTTTGGGAAGAGGCCCCCAGTTCAGTGGAAAGGCATGTTTAGGCATTGG
GTGTGGCGTTGCTGGGGGAGACCACATCTGGGGAGATGATGGGCTTCTGGTTTGTAATTT
CCCTTTAAACAAGAAGAGATGGCTCACATTTTCCATATATATCTCAATGAATGTACTGTA
TTACTGTTTTAAAAAATTTGATGAAATAATAATGGATTGGTCTCCTTTTGTTATCTGGTC
CTTGTTTAATTTGTTTAAGGGTTTTTGTATACAAAAGTTTACATTTTTATGTATATTTTT
CTTGTGTAAAAACTGATGTAATATGTGTATAAAACACTGTATGTATTATCTGTATATAGT
GTGACAAAAATGATTTTTCTTTCTTTCTTTTGGATGTATTAATAAACCTTGCTGTGAAGT
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGATTGGCAGGTTTGGGAAGAGGCCCCCAGTTCAGTGGAAAGGCATGTTTAGGCATTGG
GTGTGGCGTTGCTGGGGGAGACCACATCTGGGGAGATGATGGGCTTCTGGTTTGTAATTT
CCCTTTAAACAAGAAGAGATGGCTCACATTTTCCATATATATCTCAATGAATGTACTGTA
TTACTGTTTTAAAAAATTTGATGAAATAATAATGGATTGGTCTCCTTTTGTTATCTGGTC
CTTGTTTAATTTGTTTAAGGGTTTTTGTATACAAAAGTTTACATTTTTATGTATATTTTT
CTTGTGTAAAAACTGATGTAATATGTGTATAAAACACTGTATGTATTATCTGTATATAGT
GTGACAAAAATGATTTTTCTTTCTTTCTTTTGGATGTATTAATAAACCTTGCTGTGAAGT
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-421, gnl|bosTau2|chr2 (55159615-55160036)
               

               
               1-421, gnl|Hg17|chr2 (206684370-206683951)
               

               
               1-421, gnl|Mm7|chr1 (63288865-63288464)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-421, gnl|bosTau2|chr2 (55159615-55160036)
               

               
               1-421, gnl|Hg17|chr2 (206684370-206683951)
               

               
               1-421, gnl|Mm7|chr1 (63288865-63288464)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cki (0.165235)
               

               
               med (0.116252)
               

               
               ecc (0.115035)
               

               
               nbm (0.0993246)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)
               

               
               med (0.116252)
               

               
               ecc (0.115035)
               

               
               nbm (0.0993246)

	1-421, gnl\|bosTau2\|chr2 (55159615-55160036)
	1-421, gnl\|Hg17\|chr2 (206684370-206683951)
	1-421, gnl\|Mm7\|chr1 (63288865-63288464)