Ss1.1-rnbm22b_o2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTCACCTCGCACAGCATGGAGGAGTGTGAGGCGCTCTGCACGCGCCTGGCCATCATGG TGAATGGGCGGTTCCGCTGTCTGGGCAGCGCACAGCGCCTTAAAAGCAGATTTGGGACTG GTCACACGCTGACCCTGCGGGTGCCCTTGTCAAGATCCAAGTCGGCGGCGGCCTTCGTGG AGGAGGCATTCCCAGGGGCCGAGCTGAGGGAGGCGCACGGCGGCCACCTGCGATTCCAGC TACCGCCGGGAGGGCGCTGCTCCCTGGCGCACGTCTTTGGAGAGCTGGCTGCGCACAGCG CCAAGCAAGGCGTGGAGGACTTCTCTGTGAACCAGACCACGCTGGAGGAGGTATTCCTGT ACTTGTCCGAGGATCAAGGGAAGGAGGACCTGGAGGAGGCAGAAGTGGGGACTGAGCCTG TGCCGGGCCCGCAGAGCCCCAAACTCATCACCCAGTTCTTCGACAACCACAGTATGGCTG AGACCGTGCTCTGAGCCTCCCTCCTCTGTGGAGCTGGTGGGAGGCCCTGGGAGTGAAGAA GGCAGGACAGAGGGGTGGGACACCGGACCCAGACTCCCTGGAGGAAATAAAGAAAAGCTG ATGTGAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTCACCTCGCACAGCATGGAGGAGTGTGAGGCGCTCTGCACGCGCCTGGCCATCATGG TGAATGGGCGGTTCCGCTGTCTGGGCAGCGCACAGCGCCTTAAAAGCAGATTTGGGACTG GTCACACGCTGACCCTGCGGGTGCCCTTGTCAAGATCCAAGTCGGCGGCGGCCTTCGTGG AGGAGGCATTCCCAGGGGCCGAGCTGAGGGAGGCGCACGGCGGCCACCTGCGATTCCAGC TACCGCCGGGAGGGCGCTGCTCCCTGGCGCACGTCTTTGGAGAGCTGGCTGCGCACAGCG CCAAGCAAGGCGTGGAGGACTTCTCTGTGAACCAGACCACGCTGGAGGAGGTATTCCTGT ACTTGTCCGAGGATCAAGGGAAGGAGGACCTGGAGGAGGCAGAAGTGGGGACTGAGCCTG TGCCGGGCCCGCAGAGCCCCAAACTCATCACCCAGTTCTTCGACAACCACAGTATGGCTG AGACCGTGCTCTGAGCCTCCCTCCTCTGTGGAGCTGGTGGGAGGCCCTGGGAGTGAAGAA GGCAGGACAGAGGGGTGGGACACCGGACCCAGACTCCCTGGAGGAAATAAAGAAAAGCTG ATGTGAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 14-131, gnl|bosTau2|chr25 (4998352-4998469) | |
| 14-131, gnl|canFam2|chr6 (41752764-41752560) | |
| 14-131, gnl|danRer3|chrNA (37983960-37984170) | |
| 14-131, gnl|dasNov1|scaffold_54635 (11851-12052) | |
| 14-131, gnl|echTel1|scaffold_164606 (3346-3140) | |
| 14-131, gnl|fr1|chrUn (108190967-108191177) | |
| 14-131, gnl|galGal2|chr14 (1555660-1555459) | |
| 14-131, gnl|hg17|chr16 (2267880-2268084) | |
| 14-131, gnl|Hg17|chr16 (2268074-2267957) | |
| 14-131, gnl|loxAfr1|scaffold_35256 (10206-10410) | |
| 14-131, gnl|mm7|chr17 (22589555-22589351) | |
| 14-131, gnl|Mm7|chr17 (22589359-22589476) | |
| 14-131, gnl|monDom2|scaffold_5 (120661089-120660879) | |
| 14-131, gnl|oryCun1|scaffold_59798 (1166-1370) | |
| 14-131, gnl|panTro1|chr18 (2079375-2079579) | |
| 14-131, gnl|rheMac2|chr20 (2278252-2278456) | |
| 14-131, gnl|rn3|chr10 (13663279-13663075) | |
| 14-131, gnl|tetNig1|chr3 (9903615-9903405) | |
| 14-131, gnl|xenTro1|scaffold_12 (3679383-3679194) | |
| 349-605, gnl|bosTau2|chr7 (10319485-10319735) | |
| 349-605, gnl|Hg17|chr19 (1016267-1016565) | |
| 349-605, gnl|Mm7|chr10 (79795320-79795584) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 14-131, gnl|bosTau2|chr25 (4998352-4998469) | |
| 14-131, gnl|canFam2|chr6 (41752764-41752560) | |
| 14-131, gnl|danRer3|chrNA (37983960-37984170) | |
| 14-131, gnl|dasNov1|scaffold_54635 (11851-12052) | |
| 14-131, gnl|echTel1|scaffold_164606 (3346-3140) | |
| 14-131, gnl|fr1|chrUn (108190967-108191177) | |
| 14-131, gnl|galGal2|chr14 (1555660-1555459) | |
| 14-131, gnl|hg17|chr16 (2267880-2268084) | |
| 14-131, gnl|Hg17|chr16 (2268074-2267957) | |
| 14-131, gnl|loxAfr1|scaffold_35256 (10206-10410) | |
| 14-131, gnl|mm7|chr17 (22589555-22589351) | |
| 14-131, gnl|Mm7|chr17 (22589359-22589476) | |
| 14-131, gnl|monDom2|scaffold_5 (120661089-120660879) | |
| 14-131, gnl|oryCun1|scaffold_59798 (1166-1370) | |
| 14-131, gnl|panTro1|chr18 (2079375-2079579) | |
| 14-131, gnl|rheMac2|chr20 (2278252-2278456) | |
| 14-131, gnl|rn3|chr10 (13663279-13663075) | |
| 14-131, gnl|tetNig1|chr3 (9903615-9903405) | |
| 14-131, gnl|xenTro1|scaffold_12 (3679383-3679194) | |
| 349-605, gnl|bosTau2|chr7 (10319485-10319735) | |
| 349-605, gnl|Hg17|chr19 (1016267-1016565) | |
| 349-605, gnl|Mm7|chr10 (79795320-79795584) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| fcc (0.197785) | |
| lnt (0.142308) | |
| nca (0.136874) | |
| med (0.116252) | |
| nbm (0.0993246) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| lnt (0.142308) | |
| nca (0.136874) | |
| med (0.116252) | |
| nbm (0.0993246) |