Ss1.1-rnbm24b_a24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGGCTGAAGGCGGTGGTGGGGGAAAGGCCCTGAGAAAACTCGCTCACAGCTACTCATC ATGGATCGAGCAGCTGATCCCGTGTCTCCACTGCTGCATGAACTCACTTTCCAGGCCATG GCCTATGACCTGCTGGCCATCGAGCAGGACACGTACAGGTACGAGACCACTGGGCTCAGC GAGGCCCGGGAGAAGGCTGTGCTGCTGGATGAGGACGACGACCTGTGGGTGGAGCTTCGG CACATGCACATCGCGGACGTGTCTAAGAAGGTCACAGAGCTCCTGAAGACATTCTGTGAG AGCAAGAGGCTAACCACAGACAAGGCCAATATCAAAGACCTGTCCCATATCCTGAAAAAG ATGCCGCAGTATCAGAAGGAGCTGAACAAGTATTCTACGCATCTGCATTTAGCCGACGAC TGCATGAAGCGCTTCAAAGGTTGCGTGGAGAAGCTGTGCAGTGTGGAGCAGGACTTAGCC ATGGGCTCCGACGCAGAGGGTGAAAAGATCAAGGACGCCATGAAGCTGATTGTGCCAGTG CTGCTGGACGCAGCAGTGCCAGCCTATGACAAGATCCGGGTTCTCTTGCTCTACATCCTC CTGAGGAATGGTGTGAGTGAGGAAAACCTGGCCAAGCTGATCCAGCATGCCAATGTCCAG GCGCACAGCAGCCTCATCCGGAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGGCTGAAGGCGGTGGTGGGGGAAAGGCCCTGAGAAAACTCGCTCACAGCTACTCATC ATGGATCGAGCAGCTGATCCCGTGTCTCCACTGCTGCATGAACTCACTTTCCAGGCCATG GCCTATGACCTGCTGGCCATCGAGCAGGACACGTACAGGTACGAGACCACTGGGCTCAGC GAGGCCCGGGAGAAGGCTGTGCTGCTGGATGAGGACGACGACCTGTGGGTGGAGCTTCGG CACATGCACATCGCGGACGTGTCTAAGAAGGTCACAGAGCTCCTGAAGACATTCTGTGAG AGCAAGAGGCTAACCACAGACAAGGCCAATATCAAAGACCTGTCCCATATCCTGAAAAAG ATGCCGCAGTATCAGAAGGAGCTGAACAAGTATTCTACGCATCTGCATTTAGCCGACGAC TGCATGAAGCGCTTCAAAGGTTGCGTGGAGAAGCTGTGCAGTGTGGAGCAGGACTTAGCC ATGGGCTCCGACGCAGAGGGTGAAAAGATCAAGGACGCCATGAAGCTGATTGTGCCAGTG CTGCTGGACGCAGCAGTGCCAGCCTATGACAAGATCCGGGTTCTCTTGCTCTACATCCTC CTGAGGAATGGTGTGAGTGAGGAAAACCTGGCCAAGCTGATCCAGCATGCCAATGTCCAG GCGCACAGCAGCCTCATCCGGAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 153-263, gnl|bosTau2|chr11 (79522264-79522374) | |
| 153-263, gnl|canFam2|chr9 (59057823-59057680) | |
| 153-263, gnl|danRer3|chr21 (4209792-4209907) | |
| 153-263, gnl|dasNov1|scaffold_3815 (37785-37927) | |
| 153-263, gnl|echTel1|scaffold_293917 (15960-16101) | |
| 153-263, gnl|fr1|chrUn (239845295-239845435) | |
| 153-263, gnl|galGal2|chr17 (8477121-8476978) | |
| 153-263, gnl|hg17|chr9 (127509897-127510039) | |
| 153-263, gnl|Hg17|chr9 (127509907-127510017) | |
| 153-263, gnl|loxAfr1|scaffold_10373 (48035-48177) | |
| 153-263, gnl|mm7|chr2 (32816535-32816395) | |
| 153-263, gnl|Mm7|chr2 (32816523-32816415) | |
| 153-263, gnl|monDom2|scaffold_51 (2021509-2021654) | |
| 153-263, gnl|oryCun1|scaffold_151384 (6195-6052) | |
| 153-263, gnl|panTro1|chr11 (112326336-112326478) | |
| 153-263, gnl|rheMac2|chr15 (98916470-98916328) | |
| 153-263, gnl|rn3|chr3 (11677717-11677577) | |
| 153-263, gnl|tetNig1|chrUn_random (12662942-12662818) | |
| 153-263, gnl|xenTro1|scaffold_257 (582129-582247) | |
| 468-612, gnl|bosTau2|chr11 (79528045-79528189) | |
| 468-612, gnl|canFam2|chr9 (59051907-59051738) | |
| 468-612, gnl|danRer3|chr21 (4216086-4216255) | |
| 468-612, gnl|dasNov1|scaffold_3815 (43394-43563) | |
| 468-612, gnl|echTel1|scaffold_293917 (21960-22128) | |
| 468-612, gnl|fr1|chrUn (239846431-239846595) | |
| 468-612, gnl|galGal2|chr17 (8476248-8476078) | |
| 468-612, gnl|hg17|chr9 (127517622-127517790) | |
| 468-612, gnl|Hg17|chr9 (127517633-127517777) | |
| 468-612, gnl|mm7|chr2 (32810220-32810050) | |
| 468-612, gnl|Mm7|chr2 (32810207-32810063) | |
| 468-612, gnl|monDom2|scaffold_51 (2034003-2034174) | |
| 468-612, gnl|panTro1|chr11 (112334121-112334289) | |
| 468-612, gnl|rheMac2|chr15 (98908108-98907940) | |
| 468-612, gnl|rn3|chr3 (11672235-11672065) | |
| 468-612, gnl|tetNig1|chrUn_random (12662217-12662075) | |
| 468-612, gnl|xenTro1|scaffold_257 (585495-585651) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 153-263, gnl|bosTau2|chr11 (79522264-79522374) | |
| 153-263, gnl|canFam2|chr9 (59057823-59057680) | |
| 153-263, gnl|danRer3|chr21 (4209792-4209907) | |
| 153-263, gnl|dasNov1|scaffold_3815 (37785-37927) | |
| 153-263, gnl|echTel1|scaffold_293917 (15960-16101) | |
| 153-263, gnl|fr1|chrUn (239845295-239845435) | |
| 153-263, gnl|galGal2|chr17 (8477121-8476978) | |
| 153-263, gnl|hg17|chr9 (127509897-127510039) | |
| 153-263, gnl|Hg17|chr9 (127509907-127510017) | |
| 153-263, gnl|loxAfr1|scaffold_10373 (48035-48177) | |
| 153-263, gnl|mm7|chr2 (32816535-32816395) | |
| 153-263, gnl|Mm7|chr2 (32816523-32816415) | |
| 153-263, gnl|monDom2|scaffold_51 (2021509-2021654) | |
| 153-263, gnl|oryCun1|scaffold_151384 (6195-6052) | |
| 153-263, gnl|panTro1|chr11 (112326336-112326478) | |
| 153-263, gnl|rheMac2|chr15 (98916470-98916328) | |
| 153-263, gnl|rn3|chr3 (11677717-11677577) | |
| 153-263, gnl|tetNig1|chrUn_random (12662942-12662818) | |
| 153-263, gnl|xenTro1|scaffold_257 (582129-582247) | |
| 468-612, gnl|bosTau2|chr11 (79528045-79528189) | |
| 468-612, gnl|canFam2|chr9 (59051907-59051738) | |
| 468-612, gnl|danRer3|chr21 (4216086-4216255) | |
| 468-612, gnl|dasNov1|scaffold_3815 (43394-43563) | |
| 468-612, gnl|echTel1|scaffold_293917 (21960-22128) | |
| 468-612, gnl|fr1|chrUn (239846431-239846595) | |
| 468-612, gnl|galGal2|chr17 (8476248-8476078) | |
| 468-612, gnl|hg17|chr9 (127517622-127517790) | |
| 468-612, gnl|Hg17|chr9 (127517633-127517777) | |
| 468-612, gnl|mm7|chr2 (32810220-32810050) | |
| 468-612, gnl|Mm7|chr2 (32810207-32810063) | |
| 468-612, gnl|monDom2|scaffold_51 (2034003-2034174) | |
| 468-612, gnl|panTro1|chr11 (112334121-112334289) | |
| 468-612, gnl|rheMac2|chr15 (98908108-98907940) | |
| 468-612, gnl|rn3|chr3 (11672235-11672065) | |
| 468-612, gnl|tetNig1|chrUn_random (12662217-12662075) | |
| 468-612, gnl|xenTro1|scaffold_257 (585495-585651) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| nbm (0.198649) | |
| nlu (0.191681) | |
| ill (0.175593) | |
| eep (0.122564) | |
| med (0.116252) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nbm (0.198649) | |
| nlu (0.191681) | |
| ill (0.175593) | |
| eep (0.122564) | |
| med (0.116252) |