Non-Coding RNA Search

Ss1.1-rnbm24b_a8.5

Sequence:


               
               GGAAAGTAGAGAAATTAAAGACATGCTGCTTGAGTGCTTTATAAACATTAATTATATCAA
GAAAGAAGAGGGGAGAAGATTTCTTAGTTCTCTCTTCAATTGGAATATAAATTTTATTAA
AATGATCCATGGGACCATTAAAAACCAATTACAGGGATTACAAAAATCTTTGATGGTACA
CATCGCAGAAATTTATTTCAGAGCTTGGAAAAAGGCTTCAGGGAAAATATTGGAGGTATT
TCCTTCTTGTTTTATGAAATGTTAACGCATTTTTATTGTGTTACAGTTATGAAGGAAGTA
GCCATAGTAGGGCCATTTGACACCTGTGCTAGTACTTGTCCGTCACGCCAGAGCTCACGA
TGCGCGTCCATGTGACAGAGGCGCGGTGACCTCCACTCTCACTGCGGTCACATTCCCGCG
TGAACCCAGCCTCGAGAGGCCCCTGACTCACTGCAATGTGCAGTTTGAGTAGAATCTAGA
CTTTTGCCCCAGTCGTTTTGGCAGCTCTAGACCTGTAATGTCTGGCCACGTGTGGCTGCT
AGGCATCTGAGCCGTGGCCAGTCCAAAGTGAAATAAATGGGCTATAAATGTAAGCAACTC
ATCAGATTTGGAAGACAGTGTGGAAAAAGAAGAATGCGAACTGTCTCATGGATGTTTGAA
AAGAATATCGATTGCCTGTTGAAATTGATAGTGTGTTGGACATATCAGGCTAAACCAAAT
ACACGATTAAAATAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAAGTAGAGAAATTAAAGACATGCTGCTTGAGTGCTTTATAAACATTAATTATATCAA
GAAAGAAGAGGGGAGAAGATTTCTTAGTTCTCTCTTCAATTGGAATATAAATTTTATTAA
AATGATCCATGGGACCATTAAAAACCAATTACAGGGATTACAAAAATCTTTGATGGTACA
CATCGCAGAAATTTATTTCAGAGCTTGGAAAAAGGCTTCAGGGAAAATATTGGAGGTATT
TCCTTCTTGTTTTATGAAATGTTAACGCATTTTTATTGTGTTACAGTTATGAAGGAAGTA
GCCATAGTAGGGCCATTTGACACCTGTGCTAGTACTTGTCCGTCACGCCAGAGCTCACGA
TGCGCGTCCATGTGACAGAGGCGCGGTGACCTCCACTCTCACTGCGGTCACATTCCCGCG
TGAACCCAGCCTCGAGAGGCCCCTGACTCACTGCAATGTGCAGTTTGAGTAGAATCTAGA
CTTTTGCCCCAGTCGTTTTGGCAGCTCTAGACCTGTAATGTCTGGCCACGTGTGGCTGCT
AGGCATCTGAGCCGTGGCCAGTCCAAAGTGAAATAAATGGGCTATAAATGTAAGCAACTC
ATCAGATTTGGAAGACAGTGTGGAAAAAGAAGAATGCGAACTGTCTCATGGATGTTTGAA
AAGAATATCGATTGCCTGTTGAAATTGATAGTGTGTTGGACATATCAGGCTAAACCAAAT
ACACGATTAAAATAAAAAAAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61857606|ref|XP_599513.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61857606|ref|XP_599513.1|

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

Help | Less info


               
               30-165, gnl|bosTau2|chr4 (67277844-67277708)
               

               
               30-165, gnl|Hg17|chr7 (157979650-157979516)
               


               
               166-269, gnl|bosTau2|chr4 (67276487-67276386)
               

               
               166-269, gnl|Hg17|chr7 (157978409-157978278)
               

               
               166-269, gnl|Mm7|chr12 (114152752-114152868)
               


               
               426-736, gnl|bosTau2|chr4 (67276291-67275994)
               

               
               426-736, gnl|Hg17|chr7 (157978194-157977834)

Aligned organism(s): 7 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-165, gnl|bosTau2|chr4 (67277844-67277708)
               

               
               30-165, gnl|Hg17|chr7 (157979650-157979516)
               


               
               166-269, gnl|bosTau2|chr4 (67276487-67276386)
               

               
               166-269, gnl|Hg17|chr7 (157978409-157978278)
               

               
               166-269, gnl|Mm7|chr12 (114152752-114152868)
               


               
               426-736, gnl|bosTau2|chr4 (67276291-67275994)
               

               
               426-736, gnl|Hg17|chr7 (157978194-157977834)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               nbm (0.198649)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nbm (0.198649)
               

               
               thg (0.126791)

	30-165, gnl\|bosTau2\|chr4 (67277844-67277708)
	30-165, gnl\|Hg17\|chr7 (157979650-157979516)

	166-269, gnl\|bosTau2\|chr4 (67276487-67276386)
	166-269, gnl\|Hg17\|chr7 (157978409-157978278)
	166-269, gnl\|Mm7\|chr12 (114152752-114152868)

	426-736, gnl\|bosTau2\|chr4 (67276291-67275994)
	426-736, gnl\|Hg17\|chr7 (157978194-157977834)