Non-Coding RNA Search

Ss1.1-rnbm25b_g15.5

Sequence:


               
               CAGGATGACTGCAGAGAAGTTTCTGAACAGGCTCCCCAAATTTGTGATCCGACAAGGCGA
GGTGATTGACATCAGGGGTCCCATCCGGGACACCCTGCAGAACTGCTGTCCATTGCCTGC
CCGGATCCAGGAAATCGTGGTGGAGACGCCTGCCTTGGCTGCTGAGCGTGAGAGGAGTCA
GAAGTCGCCAGAGTCGCCGGCGCCCCAGCTCTCCATGCTGCGCATCAAATCTGAGAATGG
CGAGCAGGCCTTTCTGCTGATGATGCGGCCTGAGGACACCATCGGAGATGTGCGCGTCCT
GCTCGCGCAGGCCAGGTGGGTGTGGGGCGCGGCTGGCAGCCCGAGGGAGCGGTAGCCCCG
CCTGATCCGTTCTTTCCTGTCCCCAGGGCCGTGGATGCCACCACCTTCGAGATCTTCAGT
ACGTTCCCGCCCACAGTCTACCACGACGCTCTCACTCTGCTGGCCGCAGGCCTAGTGCCC
AGCGCCACACTGCTGCTTCGGGCGCACCGGGCCCCGCGGCCCGCCCCCCGCCCCGAATAA
AGCACCCGCCCAGAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGATGACTGCAGAGAAGTTTCTGAACAGGCTCCCCAAATTTGTGATCCGACAAGGCGA
GGTGATTGACATCAGGGGTCCCATCCGGGACACCCTGCAGAACTGCTGTCCATTGCCTGC
CCGGATCCAGGAAATCGTGGTGGAGACGCCTGCCTTGGCTGCTGAGCGTGAGAGGAGTCA
GAAGTCGCCAGAGTCGCCGGCGCCCCAGCTCTCCATGCTGCGCATCAAATCTGAGAATGG
CGAGCAGGCCTTTCTGCTGATGATGCGGCCTGAGGACACCATCGGAGATGTGCGCGTCCT
GCTCGCGCAGGCCAGGTGGGTGTGGGGCGCGGCTGGCAGCCCGAGGGAGCGGTAGCCCCG
CCTGATCCGTTCTTTCCTGTCCCCAGGGCCGTGGATGCCACCACCTTCGAGATCTTCAGT
ACGTTCCCGCCCACAGTCTACCACGACGCTCTCACTCTGCTGGCCGCAGGCCTAGTGCCC
AGCGCCACACTGCTGCTTCGGGCGCACCGGGCCCCGCGGCCCGCCCCCCGCCCCGAATAA
AGCACCCGCCCAGAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5T120_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5T120_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               173-551, gnl|bosTau2|chr2 (78144051-78143660)
               

               
               173-551, gnl|Hg17|chr1 (26293424-26292921)
               

               
               173-551, gnl|Mm7|chr4 (133504797-133505204)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               173-551, gnl|bosTau2|chr2 (78144051-78143660)
               

               
               173-551, gnl|Hg17|chr1 (26293424-26292921)
               

               
               173-551, gnl|Mm7|chr4 (133504797-133505204)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               nbm (0.198649)
               

               
               fty (0.17584)
               

               
               lnt (0.142308)
               

               
               med (0.116252)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nbm (0.198649)
               

               
               fty (0.17584)
               

               
               lnt (0.142308)
               

               
               med (0.116252)

	173-551, gnl\|bosTau2\|chr2 (78144051-78143660)
	173-551, gnl\|Hg17\|chr1 (26293424-26292921)
	173-551, gnl\|Mm7\|chr4 (133504797-133505204)