Non-Coding RNA Search

Ss1.1-rnbm27b_d20.5

Sequence:


               
               ACAACATGGTGCATCTGTCTGCTGAGGAGAAGGAGGCCGTCCTCGGCCTGTGGGGCAAAG
TGAATGTGGACGAAGTTGGTGGTGAGGCCCTGGGCAGGCTGCTGGTTGTCTACCCCTGGA
CTCAGAGGTTCTTCGAGTCCTTTGGGGACCTGTCCAATGCCGATGCCGTCATGGGCAATC
CCAAGGTGAAGGCCCACGGCAAGAAGGTGCTCCAGTCCTTCAGTGACGGCCTGAAACATC
TCGACAACCTCAAGGGCACCTTTGCTAAGCTGAGCGAGCTGCACTGTGACCAGCTGCACG
TGGATCCTGAGAACTTCAGGCTCCTGGGCAACGTGATAGTGGTTGTTCTGGCTCGCCGCC
TTGGCCATGACTTCAACCCGGATGTGCAGGCTGCTTTTCAGAAGGTGGTGGCTGGTGTGG
CCAATGCCCTGGCCCACAAGTACCACTAAGTTCCCCTTCCTGATTTCCANGGAGGAGCCC
TTTTTCCTCTGAACCCAAAAACTGGATATGGAAATATTATGAAGAGTTTTGAGCATCTGG
CCTCTGCGTAATAAAAACATTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAACATGGTGCATCTGTCTGCTGAGGAGAAGGAGGCCGTCCTCGGCCTGTGGGGCAAAG
TGAATGTGGACGAAGTTGGTGGTGAGGCCCTGGGCAGGCTGCTGGTTGTCTACCCCTGGA
CTCAGAGGTTCTTCGAGTCCTTTGGGGACCTGTCCAATGCCGATGCCGTCATGGGCAATC
CCAAGGTGAAGGCCCACGGCAAGAAGGTGCTCCAGTCCTTCAGTGACGGCCTGAAACATC
TCGACAACCTCAAGGGCACCTTTGCTAAGCTGAGCGAGCTGCACTGTGACCAGCTGCACG
TGGATCCTGAGAACTTCAGGCTCCTGGGCAACGTGATAGTGGTTGTTCTGGCTCGCCGCC
TTGGCCATGACTTCAACCCGGATGTGCAGGCTGCTTTTCAGAAGGTGGTGGCTGGTGTGG
CCAATGCCCTGGCCCACAAGTACCACTAAGTTCCCCTTCCTGATTTCCANGGAGGAGCCC
TTTTTCCTCTGAACCCAAAAACTGGATATGGAAATATTATGAAGAGTTTTGAGCATCTGG
CCTCTGCGTAATAAAAACATTTAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|5542425|pdb|1QPW|D

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|5542425|pdb|1QPW|D

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               96-320, gnl|bosTau2|chr15 (31619929-31620153)
               

               
               96-320, gnl|Hg17|chr11 (5204607-5204383)
               

               
               96-320, gnl|Mm7|chr7 (99864481-99864258)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               96-320, gnl|bosTau2|chr15 (31619929-31620153)
               

               
               96-320, gnl|Hg17|chr11 (5204607-5204383)
               

               
               96-320, gnl|Mm7|chr7 (99864481-99864258)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nbm (0.0993246)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nbm (0.0993246)

	96-320, gnl\|bosTau2\|chr15 (31619929-31620153)
	96-320, gnl\|Hg17\|chr11 (5204607-5204383)
	96-320, gnl\|Mm7\|chr7 (99864481-99864258)