Ss1.1-rnbm29b_a3.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATCTGCACAAGAAGTGTCCTTACTCTGTTCCTTTCTATCCAGCTTTCAAAGAGGGAATG GCTCTGGAAGATTATCAGAGGATGCTTGGCTACCAGGTGAAGGATTCCAAAGTAGAACAG CAGGACAACTTTCTAAAACGCATGTCTGGGATGATCCGTCTCTACGCGGCCATCATCCAG CTCCGGTGGCCCTATGGAAACCGACAAGAGACTCACCCTCACGGCTTAAATCATGGCTGG CGCTGGTTGGCACAGATCTTAAACATGGAGCCCCTGTCGGATGTGACGGCCACCCTCCTC TTTGACTTCTTAGAGGTGTGTGGGAACGCCCTCATGAAGCAGTACCAGGTCCAGTTCTGG AAGATGATACTTCTCATCAAAGAGGACTACTTCCCCAGGATCGAAGCCATCACAAGCTCA GGACAGATGGGTTCCTTCATACGCCTCAAGCAGTTCTTGGAGAAATGTTTGCAGCACAAG GATATTCCTGTCCCCAAGGGCTTTCTGACTTCCACCTTCTGGCGTTCCTGATGTCACTCC GTTTGTCACCATGTTGCAAGGGGGCAATAATAAAGCCACTGAAGACAGCTGTATTTGGGA GAAGTCGTGTAACTCTGTATTTTTATGTGTTTGTACGTCGTGACTTGGGAAGAGATTTTT GTGGGTCACAAATCTAGACGGTCCCTTAGTAGATTGATGACCCCTTAAGGGGGGGGCCAC ACAACAGAGTAAATGGAATTGGCCTTTCTCATTTTTACAAAAAACTTGCAGAACAAAAGA AAAATTATGAGAAGATTTTAGCACTTGATCTCATCCTCTGTTTCCTTTGTCTCCAGCATC TTTTAGAAGGCAGGTTGATACCGTGACCATTTCACATTTCACCCTCAGCTGAAGTGACCT GCCACTTTCACGCCACCCCCACCCCCCCGCCCCTCCCGCATGCTGCCCTGTTCAGAAGGA TGTCCGGAAAGAGGAAAGACCCATGCAGTCCCTTTACGGTATCACTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATCTGCACAAGAAGTGTCCTTACTCTGTTCCTTTCTATCCAGCTTTCAAAGAGGGAATG GCTCTGGAAGATTATCAGAGGATGCTTGGCTACCAGGTGAAGGATTCCAAAGTAGAACAG CAGGACAACTTTCTAAAACGCATGTCTGGGATGATCCGTCTCTACGCGGCCATCATCCAG CTCCGGTGGCCCTATGGAAACCGACAAGAGACTCACCCTCACGGCTTAAATCATGGCTGG CGCTGGTTGGCACAGATCTTAAACATGGAGCCCCTGTCGGATGTGACGGCCACCCTCCTC TTTGACTTCTTAGAGGTGTGTGGGAACGCCCTCATGAAGCAGTACCAGGTCCAGTTCTGG AAGATGATACTTCTCATCAAAGAGGACTACTTCCCCAGGATCGAAGCCATCACAAGCTCA GGACAGATGGGTTCCTTCATACGCCTCAAGCAGTTCTTGGAGAAATGTTTGCAGCACAAG GATATTCCTGTCCCCAAGGGCTTTCTGACTTCCACCTTCTGGCGTTCCTGATGTCACTCC GTTTGTCACCATGTTGCAAGGGGGCAATAATAAAGCCACTGAAGACAGCTGTATTTGGGA GAAGTCGTGTAACTCTGTATTTTTATGTGTTTGTACGTCGTGACTTGGGAAGAGATTTTT GTGGGTCACAAATCTAGACGGTCCCTTAGTAGATTGATGACCCCTTAAGGGGGGGGCCAC ACAACAGAGTAAATGGAATTGGCCTTTCTCATTTTTACAAAAAACTTGCAGAACAAAAGA AAAATTATGAGAAGATTTTAGCACTTGATCTCATCCTCTGTTTCCTTTGTCTCCAGCATC TTTTAGAAGGCAGGTTGATACCGTGACCATTTCACATTTCACCCTCAGCTGAAGTGACCT GCCACTTTCACGCCACCCCCACCCCCCCGCCCCTCCCGCATGCTGCCCTGTTCAGAAGGA TGTCCGGAAAGAGGAAAGACCCATGCAGTCCCTTTACGGTATCACTGG |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 76-210, gnl|bosTau2|chr11 (78376880-78377014) | |
| 76-210, gnl|canFam2|chr9 (58374025-58373858) | |
| 76-210, gnl|danRer3|chrNA (51645264-51645112) | |
| 76-210, gnl|dasNov1|scaffold_3083 (99129-98966) | |
| 76-210, gnl|fr1|chrUn (294595935-294595785) | |
| 76-210, gnl|galGal2|chr17 (5620155-5619976) | |
| 76-210, gnl|hg17|chr9 (128378171-128378339) | |
| 76-210, gnl|Hg17|chr9 (128378183-128378317) | |
| 76-210, gnl|loxAfr1|scaffold_3413 (84648-84480) | |
| 76-210, gnl|mm7|chr2 (29957896-29958064) | |
| 76-210, gnl|Mm7|chr2 (29957908-29958042) | |
| 76-210, gnl|monDom2|scaffold_51 (3085803-3085967) | |
| 76-210, gnl|oryCun1|scaffold_173262 (974-807) | |
| 76-210, gnl|panTro1|chr11 (113211776-113211944) | |
| 76-210, gnl|rheMac2|chr15 (10328709-10328541) | |
| 76-210, gnl|rn3|chr3 (8940667-8940835) | |
| 76-210, gnl|tetNig1|chr12 (10063815-10063967) | |
| 76-210, gnl|xenTro1|scaffold_82 (309203-309056) | |
| 461-1006, gnl|bosTau2|chr11 (78381409-78381947) | |
| 461-1006, gnl|Hg17|chr9 (128382933-128383452) | |
| 461-1006, gnl|Mm7|chr2 (29965756-29966248) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 76-210, gnl|bosTau2|chr11 (78376880-78377014) | |
| 76-210, gnl|canFam2|chr9 (58374025-58373858) | |
| 76-210, gnl|danRer3|chrNA (51645264-51645112) | |
| 76-210, gnl|dasNov1|scaffold_3083 (99129-98966) | |
| 76-210, gnl|fr1|chrUn (294595935-294595785) | |
| 76-210, gnl|galGal2|chr17 (5620155-5619976) | |
| 76-210, gnl|hg17|chr9 (128378171-128378339) | |
| 76-210, gnl|Hg17|chr9 (128378183-128378317) | |
| 76-210, gnl|loxAfr1|scaffold_3413 (84648-84480) | |
| 76-210, gnl|mm7|chr2 (29957896-29958064) | |
| 76-210, gnl|Mm7|chr2 (29957908-29958042) | |
| 76-210, gnl|monDom2|scaffold_51 (3085803-3085967) | |
| 76-210, gnl|oryCun1|scaffold_173262 (974-807) | |
| 76-210, gnl|panTro1|chr11 (113211776-113211944) | |
| 76-210, gnl|rheMac2|chr15 (10328709-10328541) | |
| 76-210, gnl|rn3|chr3 (8940667-8940835) | |
| 76-210, gnl|tetNig1|chr12 (10063815-10063967) | |
| 76-210, gnl|xenTro1|scaffold_82 (309203-309056) | |
| 461-1006, gnl|bosTau2|chr11 (78381409-78381947) | |
| 461-1006, gnl|Hg17|chr9 (128382933-128383452) | |
| 461-1006, gnl|Mm7|chr2 (29965756-29966248) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ill (0.175593) | |
| tbr (0.154178) | |
| ssp (0.13552) | |
| nbm (0.0993246) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| tbr (0.154178) | |
| ssp (0.13552) | |
| nbm (0.0993246) |