Non-Coding RNA Search

Ss1.1-rnca02b_c20.5

Sequence:


               
               CACTTCCCCTCACTTTTCAGGGCCATTTCTTCCCACATTGGGCTGTTGGTTCAAACTTCT
CAGAGCCCAGAGCCAGGGACCATCAGTTCTCTGGAATCCACCACACCTCGGGGGGCGGGG
GGGGGGCTGGGGATCACTACATCCGACAGGGGTGCCCCCCGCAACTATCTTGGGGAGACG
CAGAACTGGGAGGCCAAAATCAAGAGTGAGGCGCAGGAAGTTGTAAAATAGAAAAAGTGC
AGTTGGTGAAGTGTTTCGTTGGTGGGGGCTTTGGTTTTTTCTTTTTCCACATTGGGATAC
CTATTATGAGGGATCTTTCCTTGGCTTTCTAGCATGTTCCCCCACCCCCCCCCCTTTTCC
CTCTATTAATCAAGAGAAACTTCAAAGTCAATGGGATGGTCGGATCTCACAGGCTGAGAA
CTCGTTCACCTCCAAGCATTTCATGAAAAAGCTGCTTCTTATTAATCATGCAAACTCTGG
CCACGATGTGAAGGGTTGGACAAATCTTTCAAAATAAAAAGTAATGACTTAGAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACTTCCCCTCACTTTTCAGGGCCATTTCTTCCCACATTGGGCTGTTGGTTCAAACTTCT
CAGAGCCCAGAGCCAGGGACCATCAGTTCTCTGGAATCCACCACACCTCGGGGGGCGGGG
GGGGGGCTGGGGATCACTACATCCGACAGGGGTGCCCCCCGCAACTATCTTGGGGAGACG
CAGAACTGGGAGGCCAAAATCAAGAGTGAGGCGCAGGAAGTTGTAAAATAGAAAAAGTGC
AGTTGGTGAAGTGTTTCGTTGGTGGGGGCTTTGGTTTTTTCTTTTTCCACATTGGGATAC
CTATTATGAGGGATCTTTCCTTGGCTTTCTAGCATGTTCCCCCACCCCCCCCCCTTTTCC
CTCTATTAATCAAGAGAAACTTCAAAGTCAATGGGATGGTCGGATCTCACAGGCTGAGAA
CTCGTTCACCTCCAAGCATTTCATGAAAAAGCTGCTTCTTATTAATCATGCAAACTCTGG
CCACGATGTGAAGGGTTGGACAAATCTTTCAAAATAAAAAGTAATGACTTAGAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               191-535, gnl|bosTau2|chr7 (43425795-43425451)
               

               
               191-535, gnl|Hg17|chr5 (151022510-151022194)
               

               
               191-535, gnl|Mm7|chr11 (55351585-55351261)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               191-535, gnl|bosTau2|chr7 (43425795-43425451)
               

               
               191-535, gnl|Hg17|chr5 (151022510-151022194)
               

               
               191-535, gnl|Mm7|chr11 (55351585-55351261)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               jca (0.34188)
               

               
               nca (0.136874)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.34188)
               

               
               nca (0.136874)

	191-535, gnl\|bosTau2\|chr7 (43425795-43425451)
	191-535, gnl\|Hg17\|chr5 (151022510-151022194)
	191-535, gnl\|Mm7\|chr11 (55351585-55351261)