Ss1.1-rnca02b_j11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCCGGGACCCAACAGCCTGCGGTTTGGGATCGTGGGTGGGAACAGCCGGGGCCACTTT GTGATGCAGCGCTCAGACCGCCAGACCGGAGAGCTGATCCTCGTCCAGACCCTGGAGGGG CCTCAGACGCTGGAGGTGGACGTGGACATGTCGGAATACCTGGATCGCTCCTTCCAGGCC AACCACGTGTCCAAGGTCACCATCTTTGTGTCCCCTTATGACTTCTAAGGGTGCCGTGGG GGTCATCTCTCTTCCTCAAAGTCTCAGCGACAGACATCTCTCCCCAGCCCCCCTTGCCCC CTGCCTGCCTGCCCGTCCCTCCAGGTCCCCGTGGAGTGGCACAGAAGCGCAGACCCCAAA CCCAAACTGTGGCCATCACATTTTGTCTGCTTAGGGGCCCTTCCCTGGGATTATGCACTT TCTCAAATCTTTTTTTTTGCAGGGGAATGGGCAGCTTTTCAAAATGCCGTGTGCATGGCG TTGTGAGTCTGAGCTAGCTGGGGAAGAAGAGCCATGGAATGTGTCTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCCGGGACCCAACAGCCTGCGGTTTGGGATCGTGGGTGGGAACAGCCGGGGCCACTTT GTGATGCAGCGCTCAGACCGCCAGACCGGAGAGCTGATCCTCGTCCAGACCCTGGAGGGG CCTCAGACGCTGGAGGTGGACGTGGACATGTCGGAATACCTGGATCGCTCCTTCCAGGCC AACCACGTGTCCAAGGTCACCATCTTTGTGTCCCCTTATGACTTCTAAGGGTGCCGTGGG GGTCATCTCTCTTCCTCAAAGTCTCAGCGACAGACATCTCTCCCCAGCCCCCCTTGCCCC CTGCCTGCCTGCCCGTCCCTCCAGGTCCCCGTGGAGTGGCACAGAAGCGCAGACCCCAAA CCCAAACTGTGGCCATCACATTTTGTCTGCTTAGGGGCCCTTCCCTGGGATTATGCACTT TCTCAAATCTTTTTTTTTGCAGGGGAATGGGCAGCTTTTCAAAATGCCGTGTGCATGGCG TTGTGAGTCTGAGCTAGCTGGGGAAGAAGAGCCATGGAATGTGTCTGA |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-241, gnl|bosTau2|chr6 (54282160-54281920) | |
| 1-241, gnl|canFam2|chr17 (39682190-39682594) | |
| 1-241, gnl|danRer3|chrNA (111140353-111139952) | |
| 1-241, gnl|echTel1|scaffold_288028 (51263-51668) | |
| 1-241, gnl|fr1|chrUn (25234052-25234433) | |
| 1-241, gnl|galGal2|chr3 (3127472-3127868) | |
| 1-241, gnl|hg17|chr2 (112660914-112661318) | |
| 1-241, gnl|Hg17|chr2 (112661087-112661327) | |
| 1-241, gnl|loxAfr1|scaffold_30876 (6555-6949) | |
| 1-241, gnl|mm7|chr2 (128636045-128636446) | |
| 1-241, gnl|Mm7|chr2 (128636215-128636461) | |
| 1-241, gnl|monDom2|scaffold_1 (63519183-63518782) | |
| 1-241, gnl|oryCun1|scaffold_141285 (17055-16652) | |
| 1-241, gnl|panTro1|chr12 (115790368-115790772) | |
| 1-241, gnl|rheMac2|chr13 (111601704-111602109) | |
| 1-241, gnl|rn3|chr3 (116421427-116421828) | |
| 1-241, gnl|tetNig1|chr17 (3235181-3234801) | |
| 1-241, gnl|xenTro1|scaffold_658 (285540-285147) | |
| 271-528, gnl|bosTau2|chr6 (54281852-54281592) | |
| 271-528, gnl|Hg17|chr2 (112661394-112661670) | |
| 271-528, gnl|Mm7|chr2 (128636528-128636829) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-241, gnl|bosTau2|chr6 (54282160-54281920) | |
| 1-241, gnl|canFam2|chr17 (39682190-39682594) | |
| 1-241, gnl|danRer3|chrNA (111140353-111139952) | |
| 1-241, gnl|echTel1|scaffold_288028 (51263-51668) | |
| 1-241, gnl|fr1|chrUn (25234052-25234433) | |
| 1-241, gnl|galGal2|chr3 (3127472-3127868) | |
| 1-241, gnl|hg17|chr2 (112660914-112661318) | |
| 1-241, gnl|Hg17|chr2 (112661087-112661327) | |
| 1-241, gnl|loxAfr1|scaffold_30876 (6555-6949) | |
| 1-241, gnl|mm7|chr2 (128636045-128636446) | |
| 1-241, gnl|Mm7|chr2 (128636215-128636461) | |
| 1-241, gnl|monDom2|scaffold_1 (63519183-63518782) | |
| 1-241, gnl|oryCun1|scaffold_141285 (17055-16652) | |
| 1-241, gnl|panTro1|chr12 (115790368-115790772) | |
| 1-241, gnl|rheMac2|chr13 (111601704-111602109) | |
| 1-241, gnl|rn3|chr3 (116421427-116421828) | |
| 1-241, gnl|tetNig1|chr17 (3235181-3234801) | |
| 1-241, gnl|xenTro1|scaffold_658 (285540-285147) | |
| 271-528, gnl|bosTau2|chr6 (54281852-54281592) | |
| 271-528, gnl|Hg17|chr2 (112661394-112661670) | |
| 271-528, gnl|Mm7|chr2 (128636528-128636829) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.136874) | |
| ssp (0.13552) | |
| pgl (0.118483) |