Ss1.1-rnca02b_m1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATAGGATTACTTTAATGTTCAGTACAACAGAATACCTTTAATGCTAAGAATTATAAGTG ATAGAAAACTAATATTTTATACAGTGTTTTATATATTAAAACTTTCTCCTAAAAGCCTTT TGTATGAAACCCAGAGAATCAGAATGAAATGTTATTTAACTTAGGCCAACTGTCAGATAA GTACTACACTGAAGAACAATTAATAGTAAAACTGTGAAAGTCAGTTATATTCTAGTTGAT CTTCACTTATAAAAGACCTATTTGCAGGGTTCAGCCTGGATTATTATTTCCTAGGTCAGA GCTCTAAATTGGTTCTTCCATTTTTTAATATATTCGTAATTTTTAGTATTAAACACTAAA GTACTACTAAAATAGTAGTGTTTCTTTTAAATGTATTACATCTGTAGTGAAAATGACTAT AGGTAAAATGTAATAAGTTACCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATAGGATTACTTTAATGTTCAGTACAACAGAATACCTTTAATGCTAAGAATTATAAGTG ATAGAAAACTAATATTTTATACAGTGTTTTATATATTAAAACTTTCTCCTAAAAGCCTTT TGTATGAAACCCAGAGAATCAGAATGAAATGTTATTTAACTTAGGCCAACTGTCAGATAA GTACTACACTGAAGAACAATTAATAGTAAAACTGTGAAAGTCAGTTATATTCTAGTTGAT CTTCACTTATAAAAGACCTATTTGCAGGGTTCAGCCTGGATTATTATTTCCTAGGTCAGA GCTCTAAATTGGTTCTTCCATTTTTTAATATATTCGTAATTTTTAGTATTAAACACTAAA GTACTACTAAAATAGTAGTGTTTCTTTTAAATGTATTACATCTGTAGTGAAAATGACTAT AGGTAAAATGTAATAAGTTACCTA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 233-350, - strand, RNAz p=0.742986 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 233-350, - strand, RNAz p=0.742986 |
| Aligned organism(s): 4 entry(ies) | More info |
| Aligned organism(s): 4 entry(ies) | Help | Less info |
| 13-350, gnl|bosTau2|chr20 (8842729-8843058) | |
| 13-350, gnl|Hg17|chr5 (64922838-64922537) | |
| 13-350, gnl|Mm7|chr13 (101339552-101339845) | |
| 154-348, gnl|bosTau2|chr13 (15460154-15459962) |
| Aligned organism(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 13-350, gnl|bosTau2|chr20 (8842729-8843058) | |
| 13-350, gnl|Hg17|chr5 (64922838-64922537) | |
| 13-350, gnl|Mm7|chr13 (101339552-101339845) | |
| 154-348, gnl|bosTau2|chr13 (15460154-15459962) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.136874) | |
| ese (0.126502) |