Non-Coding RNA Search

Ss1.1-rnca03b_p23.5

Sequence:


               
               CATAGATATGCATCATGGAATGAGAAGAGAAAGGAATGAGTTGCCTGATGTCACAGTCAG
ATCTGTGCTGTGTGAGGTTCATTTCTGAATACACCAGAGCAGATTTCCAATGAATCTGTT
TATTTTTCCCATTTTAACACTGACCTTTCCTTGCCATGTTGTTTCCTTTAAATAATATAC
TGTTAGTTGGTCTGCTTCTGTTTTCATTTTGACAGTTTGGGTTTATCTTTTAAATGTTGG
ACTGAAGGTGTGATTGTAAAGGGAGTGAATTGGTTTAAAATATATGTATACTTTAAAAAA
TCTTTGTTGTTATATGTAGAAAACTTGAAGGCATGCTACTTCAATATAAATAACTTTTAC
ATAGAATACAGAAATTGGTTTAAAGTTGAGTAGTTAAAACCTTGGTAAACTATTTTTACA
TATTATAGCTAAGTTTTATTAATGTGGAAACATCAGAGTGTGACATGGGCTTGTTTGACT
CTTGTGTAAATGGCATTTAAATTCCTCATTCGTATCACTCAAGGTATTATTAGTAACATG
AGATACTCAGTGAGATTAGGGGCATTTTAAATTGCCAGTTTATAATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATAGATATGCATCATGGAATGAGAAGAGAAAGGAATGAGTTGCCTGATGTCACAGTCAG
ATCTGTGCTGTGTGAGGTTCATTTCTGAATACACCAGAGCAGATTTCCAATGAATCTGTT
TATTTTTCCCATTTTAACACTGACCTTTCCTTGCCATGTTGTTTCCTTTAAATAATATAC
TGTTAGTTGGTCTGCTTCTGTTTTCATTTTGACAGTTTGGGTTTATCTTTTAAATGTTGG
ACTGAAGGTGTGATTGTAAAGGGAGTGAATTGGTTTAAAATATATGTATACTTTAAAAAA
TCTTTGTTGTTATATGTAGAAAACTTGAAGGCATGCTACTTCAATATAAATAACTTTTAC
ATAGAATACAGAAATTGGTTTAAAGTTGAGTAGTTAAAACCTTGGTAAACTATTTTTACA
TATTATAGCTAAGTTTTATTAATGTGGAAACATCAGAGTGTGACATGGGCTTGTTTGACT
CTTGTGTAAATGGCATTTAAATTCCTCATTCGTATCACTCAAGGTATTATTAGTAACATG
AGATACTCAGTGAGATTAGGGGCATTTTAAATTGCCAGTTTATAATTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-588, gnl|bosTau2|chr22 (6080398-6081005)
               

               
               1-588, gnl|Hg17|chr3 (33884186-33884780)
               

               
               1-588, gnl|Mm7|chr9 (113359635-113359083)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-588, gnl|bosTau2|chr22 (6080398-6081005)
               

               
               1-588, gnl|Hg17|chr3 (33884186-33884780)
               

               
               1-588, gnl|Mm7|chr9 (113359635-113359083)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nca (0.136874)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)

	1-588, gnl\|bosTau2\|chr22 (6080398-6081005)
	1-588, gnl\|Hg17\|chr3 (33884186-33884780)
	1-588, gnl\|Mm7\|chr9 (113359635-113359083)