Ss1.1-rnca04b_e16.5
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AGGGCGCGGCGTCTTCCCGGGCGGGCGAGCGGGAGCCGGACCGCGCGTCCCCCTCCCCAC
GCTCACAGTATTTTCAGGGACGGGTCGCCCCCCACCTCCCTTGACGAGACGGTAGCTTCT
TCCCTCCCCACAGACACCCTGGGAGCGGGGCGGGGGCAGGGGCTTCTCAGGTCTCTGTCG
TAAAAGGGGGACCTGGGGGCGGGCGGGGTGGCTCCGCCCACTGGACCCCCTGCTAACTGA
CAATCCGGGCTCCCTCGGATCCTGACCTTAAGCTGCAAATGACCGGGGCCCTTAGCCCCC
CCGGGGACAGTCCACCCGGGAGAGTGGCGCTAGAGGAGGTGGGGGGGCCAGACAGGCGGC
CGTCAGCCAACGGGGGGGTCCCGCGGACCCCCTCCACCCGGGCACCCGAGTGCCTTTTCT
CAGGGCTCAGTCTGATCATGGCCACGTCACGCCCGGTCGCTCCCCGGCTCTGGCGTGGAA
GCTCTGTCGGCCCCCTACTCCGGGCGTCTCAGAATCCCCCGACCCCCAAGGGCGGTGTCT
CTGCCCCGCCCGCCTTCAGGAAAGGCCGCGGCCGCCACGCCCCCTCCGCCCGCGCCAGAG
TCAGAAGTCGCGTGACCCGCGGGGCCGGGGAGACTCTGACGCCCTGCGCCCTCGGGTGGG
ACACTATGCAATCCAGGCTTTCTTTTTTACCGCACACGTGCTTCTGCCAGCGGGGCGCCC
CGCGGCCGTCTGGCTTCTAGCTGTTCGCCCATTTCCTTAGTTTCTTAAGACAGCGGTTCG
CTTCCCTTCCCTGTTGAAAAATACTTGAATGTGGGGGGGGAGGGGTGGCTCGGGTGCGGT
CTCTGCGGCCCTCTCAGCCTCGTAGATTGTCGCAGTCCGTGGTGGCTGGTGGGGGGCCGC
CGCCCCCGCCCGCCCGGATCTGTGGACTGGCCTTTCCAAAGACTGGGGGTGGGGAGGCCA
CCCCCCATCATTTCTCGCCCATCAGTGATTCCACGTTTTGCAATTTTGGGGATTCTGCCT
TTTTGTAAAAAAAAAAACAAATGGATTCTCCCGCAGCCGGCGCCATGGCCATTTTACTAG
GGAAAGCTGAGCTGTGAGCAGCTTTTTTTTTTTTTTTTTCCTTCAAAGGTGGGACAGCCA
CTTCCTCCCCCCTGTCATCGACAGCGCGGCCCGGAGGACTGGTCAGAACCGTTACTGTGA
ATGAGCAACCTGGTCCCAGGCTGCTCTGGCGCTGGGGGAAGGGGGAATAGCAGTGTTTCA
ATGTTAAGATGTGTAAAAAAGACAAAAAAAAACCAACTTTTTTTTAAAGTGGGGGAAAAA
ACATCCAAGCACTTTAACTCCACTTACCAGGTGAACTGATACAGCTCAGAAGTTTTCCTT
GACACCAACTGTCAATGCCGGAATTTTATATTCTGTTTTGTAAGGATTTAATAAAAGTCA
TAAAAACTAAAAAAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AGGGCGCGGCGTCTTCCCGGGCGGGCGAGCGGGAGCCGGACCGCGCGTCCCCCTCCCCAC
GCTCACAGTATTTTCAGGGACGGGTCGCCCCCCACCTCCCTTGACGAGACGGTAGCTTCT
TCCCTCCCCACAGACACCCTGGGAGCGGGGCGGGGGCAGGGGCTTCTCAGGTCTCTGTCG
TAAAAGGGGGACCTGGGGGCGGGCGGGGTGGCTCCGCCCACTGGACCCCCTGCTAACTGA
CAATCCGGGCTCCCTCGGATCCTGACCTTAAGCTGCAAATGACCGGGGCCCTTAGCCCCC
CCGGGGACAGTCCACCCGGGAGAGTGGCGCTAGAGGAGGTGGGGGGGCCAGACAGGCGGC
CGTCAGCCAACGGGGGGGTCCCGCGGACCCCCTCCACCCGGGCACCCGAGTGCCTTTTCT
CAGGGCTCAGTCTGATCATGGCCACGTCACGCCCGGTCGCTCCCCGGCTCTGGCGTGGAA
GCTCTGTCGGCCCCCTACTCCGGGCGTCTCAGAATCCCCCGACCCCCAAGGGCGGTGTCT
CTGCCCCGCCCGCCTTCAGGAAAGGCCGCGGCCGCCACGCCCCCTCCGCCCGCGCCAGAG
TCAGAAGTCGCGTGACCCGCGGGGCCGGGGAGACTCTGACGCCCTGCGCCCTCGGGTGGG
ACACTATGCAATCCAGGCTTTCTTTTTTACCGCACACGTGCTTCTGCCAGCGGGGCGCCC
CGCGGCCGTCTGGCTTCTAGCTGTTCGCCCATTTCCTTAGTTTCTTAAGACAGCGGTTCG
CTTCCCTTCCCTGTTGAAAAATACTTGAATGTGGGGGGGGAGGGGTGGCTCGGGTGCGGT
CTCTGCGGCCCTCTCAGCCTCGTAGATTGTCGCAGTCCGTGGTGGCTGGTGGGGGGCCGC
CGCCCCCGCCCGCCCGGATCTGTGGACTGGCCTTTCCAAAGACTGGGGGTGGGGAGGCCA
CCCCCCATCATTTCTCGCCCATCAGTGATTCCACGTTTTGCAATTTTGGGGATTCTGCCT
TTTTGTAAAAAAAAAAACAAATGGATTCTCCCGCAGCCGGCGCCATGGCCATTTTACTAG
GGAAAGCTGAGCTGTGAGCAGCTTTTTTTTTTTTTTTTTCCTTCAAAGGTGGGACAGCCA
CTTCCTCCCCCCTGTCATCGACAGCGCGGCCCGGAGGACTGGTCAGAACCGTTACTGTGA
ATGAGCAACCTGGTCCCAGGCTGCTCTGGCGCTGGGGGAAGGGGGAATAGCAGTGTTTCA
ATGTTAAGATGTGTAAAAAAGACAAAAAAAAACCAACTTTTTTTTAAAGTGGGGGAAAAA
ACATCCAAGCACTTTAACTCCACTTACCAGGTGAACTGATACAGCTCAGAAGTTTTCCTT
GACACCAACTGTCAATGCCGGAATTTTATATTCTGTTTTGTAAGGATTTAATAAAAGTCA
TAAAAACTAAAAAAAAAAAAAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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sme (0.305437) |
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cga (0.279096) |
|
che (0.272628) |
|
pla (0.267344) |
|
ese (0.253004) |
|
fli (0.202881) |
|
nlu (0.191681) |
|
cmu (0.186393) |
|
fty (0.17584) |
|
ton (0.1755) |
|
mcp (0.170648) |
|
bfe (0.149858) |
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lnt (0.142308) |
|
csk (0.140746) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
cov (0.132153) |
|
pgl (0.118483) |
|
sme (0.305437) |
|
cga (0.279096) |
|
che (0.272628) |
|
pla (0.267344) |
|
ese (0.253004) |
|
fli (0.202881) |
|
nlu (0.191681) |
|
cmu (0.186393) |
|
fty (0.17584) |
|
ton (0.1755) |
|
mcp (0.170648) |
|
bfe (0.149858) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
cov (0.132153) |
|
pgl (0.118483) |