Non-Coding RNA Search

Ss1.1-rnca08b_c13.5

Sequence:


               
               GTCCCATACAGTTTGAATATAGCATCTGGAGTAACCGTATTGTCCGCGTCATGCCAACAA
ATTCCCTATTGTGGTGTTAAATGCTTTTAAAATATTATTTAAATCCTAGAGATCATTTAG
GATAATACTTCCAGACATTTTTTGGGGGGTGGGGAGTTGCTAGGGAGGGAGAGAGCGATA
TCAGGGGAAAGCTTAGTTCTGTGAACAAGCTTCAGTAAGTTATCTTTGAATATTTAGTTT
CTACAACTATGTGTGGCTGGAACCACATTGAATTTTAAAGTAATGAAATTCATTATCTCT
AAGGATCACTTAATTCTTGTGTGCGATACGAAAACTGTAGTTGCAATATTCCCGGATCAA
AAATGGAATATGTGCTCTGTCAAAAAAAGCTCAATATATTTATAAGGAGACTTTGTAAAG
ACATAAAAGTAAATCACATTTACATCATCAATCAACCATCTTTACTAGTAGTATAAAATG
GTATGAAAATAGAATTCAGGGGAGCATATGACAGCCATACACAAAGGTAAACCGAAGGGA
AATGTCTGTAATAGATATCTTGCAGACAGCTTTCCAGAGATAATCTGAGTTTTGTACTAA
AAATATTGGGATGTACATGCCCCTCTTCATGCAGACACTAAGGAAATGTCAACACTACCA
AAGACAAGAGACAAACACTAATGGTGAGGACAGTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCCCATACAGTTTGAATATAGCATCTGGAGTAACCGTATTGTCCGCGTCATGCCAACAA
ATTCCCTATTGTGGTGTTAAATGCTTTTAAAATATTATTTAAATCCTAGAGATCATTTAG
GATAATACTTCCAGACATTTTTTGGGGGGTGGGGAGTTGCTAGGGAGGGAGAGAGCGATA
TCAGGGGAAAGCTTAGTTCTGTGAACAAGCTTCAGTAAGTTATCTTTGAATATTTAGTTT
CTACAACTATGTGTGGCTGGAACCACATTGAATTTTAAAGTAATGAAATTCATTATCTCT
AAGGATCACTTAATTCTTGTGTGCGATACGAAAACTGTAGTTGCAATATTCCCGGATCAA
AAATGGAATATGTGCTCTGTCAAAAAAAGCTCAATATATTTATAAGGAGACTTTGTAAAG
ACATAAAAGTAAATCACATTTACATCATCAATCAACCATCTTTACTAGTAGTATAAAATG
GTATGAAAATAGAATTCAGGGGAGCATATGACAGCCATACACAAAGGTAAACCGAAGGGA
AATGTCTGTAATAGATATCTTGCAGACAGCTTTCCAGAGATAATCTGAGTTTTGTACTAA
AAATATTGGGATGTACATGCCCCTCTTCATGCAGACACTAAGGAAATGTCAACACTACCA
AAGACAAGAGACAAACACTAATGGTGAGGACAGTAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-696, gnl|bosTau2|chr23 (15598806-15599502)
               

               
               3-696, gnl|Hg17|chr11 (102320282-102319600)
               

               
               3-696, gnl|Mm7|chr9 (7279325-7280010)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-696, gnl|bosTau2|chr23 (15598806-15599502)
               

               
               3-696, gnl|Hg17|chr11 (102320282-102319600)
               

               
               3-696, gnl|Mm7|chr9 (7279325-7280010)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nca (0.547495)
               

               
               nmm (0.132802)
               

               
               nbm (0.0993246)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.547495)
               

               
               nmm (0.132802)
               

               
               nbm (0.0993246)

	3-696, gnl\|bosTau2\|chr23 (15598806-15599502)
	3-696, gnl\|Hg17\|chr11 (102320282-102319600)
	3-696, gnl\|Mm7\|chr9 (7279325-7280010)